Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq1669 107 2e-18
seq136 89.7 5e-13
seq2234 86.0 7e-12
seq1602 86.0 7e-12
>seq1669
Length=5184857
Score = 107 bits (118), Expect = 2e-18
Identities = 98/124 (79%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590
||||||| || || || | |||||| ||||| || | ||| ||||| | |||| ||| |
Sbjct 4063060 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTTTTCT 4063001
Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650
| | ||| ||||| |||||||| ||||| || |||||||| || || ||||| |||||||
Sbjct 4063000 TTAACCAGAATATAGCAGCAAAGGATCCCGAGAAGAAAATTCCTTCCACAGCAGCAAAGG 4062941
Query 23651 CCAC 23654
||||
Sbjct 4062940 CCAC 4062937
>seq136
Length=3211738
Score = 89.7 bits (98), Expect = 5e-13
Identities = 60/67 (90%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||||||| |||||||||||||||| |||||||||||| |||||||| |
Sbjct 1951294 CTCCTGGGCTCAAGCTATTTTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACA 1951353
Query 8465 AGCCACC 8471
||||||
Sbjct 1951354 TGCCACC 1951360
>seq2234
Length=803312
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||| || ||||||||||||||||| |||||||||||| |||||| |
Sbjct 512516 CTCCTGGGCTCAAGCAATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCA 512575
Query 8465 AGCCACCACGCC 8476
|||||||||||
Sbjct 512576 TGCCACCACGCC 512587
>seq1602
Length=2211405
Score = 86.0 bits (94), Expect = 7e-12
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| | | |||| || ||||||||||||||||| |||||||||||| |||||||| |
Sbjct 713886 CTCCTGAGCTCAACTGATCCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCACA 713945
Query 8465 AGCCACCACGCCAAGCTAATTT 8486
||||||||||| |||| |||
Sbjct 713946 TGCCACCACGCCTGGCTATTTT 713967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521471768686000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |