Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2363 150 1e-31 seq1424 141 7e-29 seq1689 98.7 7e-16 seq2201 82.4 5e-11 seq1 82.4 5e-11 >seq2363 Length=646923 Score = 150 bits (166), Expect = 1e-31 Identities = 174/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || | | |||||||| || ||| |||||| ||||||||||| || Sbjct 186445 CATCCCACCTCTGAGACGGAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 186386 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| |||| ||||||||||| ||||||||||||| | |||||| || | Sbjct 186385 GGACAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGG 186326 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| ||| ||||| ||| | |||| | ||||||||| || | Sbjct 186325 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC-GTTCTCGATGGTGTCGCTGGGCT 186267 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| || || ||||| | ||| ||||||||||||||||| ||||| Sbjct 186266 CCACCTCCAGGGTGATGGTCTTCCGCGTCAGGGTCTTCACGAAGATCTGCAT 186215 Score = 150 bits (166), Expect = 1e-31 Identities = 174/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || | | |||||||| || ||| |||||| ||||||||||| || Sbjct 186673 CATCCCACCTCTGAGACGGAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 186614 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| |||| ||||||||||| ||||||||||||| | |||||| || | Sbjct 186613 GGACAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGG 186554 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| ||| ||||| ||| | |||| | ||||||||| || | Sbjct 186553 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC-GTTCTCGATGGTGTCGCTGGGCT 186495 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| || || ||||| || || ||||||||||||||||| ||||| Sbjct 186494 CCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 186443 Score = 150 bits (166), Expect = 1e-31 Identities = 174/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || | | |||||||| || ||| |||||| ||||||||||| || Sbjct 187120 CATCCCACCTCTGAGACGGAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 187061 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| |||| ||||||||||| ||||||||||||| | |||||| || | Sbjct 187060 GGACAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGG 187001 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| ||| ||||| ||| | |||| | ||||||||| || | Sbjct 187000 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC-GTTCTCGATGGTGTCGCTGGGCT 186942 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| || || ||||| || || ||||||||||||||||| ||||| Sbjct 186941 CCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 186890 Score = 150 bits (166), Expect = 1e-31 Identities = 174/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || | | |||||||| || || |||||| ||||||||||| || Sbjct 187681 CATCCCACCTCTGAGACGGAGGACCAGGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTC 187622 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| |||| ||||||||||| |||||||||||||| | |||||| || | Sbjct 187621 GGACAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCAGG 187562 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| ||| ||||| ||| | |||| | ||||||||| || | Sbjct 187561 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC-GTTCTCGATGGTGTCGCTGGGCT 187503 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| || || ||||| || || ||||||||||||||||| ||||| Sbjct 187502 CCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 187451 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| | | |||||||| || ||| |||||| ||||||||||| |||| Sbjct 187905 CCTCCTCTCAAGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 187846 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| |||| ||||||||||| ||||||||||||| | |||||| || | || Sbjct 187845 AGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 187786 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | |||||||| || ||||| ||| | |||| | ||||||||| || ||||| Sbjct 187785 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGAC-GTTCTCGATGGTGTCGCTGGGCTCCAC 187727 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || || ||||| || || ||||||||||||||||| ||||| Sbjct 187726 CTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 187679 Score = 145 bits (160), Expect = 5e-30 Identities = 167/221 (76%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 44118 TCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGC 44177 |||| | || |||||||| || ||| |||||| ||||||||||| |||| || || Sbjct 186889 TCAGACGCAGGACCAGGTGCAGGGTGA-CTCCTTCTGGATGTTGTAGTCGGACAGGGTGC 186831 Query 44178 GCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTT 44237 | |||| ||||||||||| ||||||||||||| | |||||| || | || | || | Sbjct 186830 GGCCGTCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCT 186771 Query 44238 CCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACC 44296 |||| ||| ||||| ||| | |||| | ||||||||| || |||||||||| Sbjct 186770 CCTTGTCCTGGATCTTGGCCTTGAC-GTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGG 186712 Query 44297 GTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||| || || ||||||||||||||||| ||||| Sbjct 186711 GTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 186671 Score = 138 bits (152), Expect = 8e-28 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 44134 GTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTG 44193 ||| || ||| |||||| ||||||||||| |||| || ||| |||| |||||||| Sbjct 187321 GTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCCAGCTG 187262 Query 44194 CTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTT 44253 ||| ||||||||||||| | |||||| || | || | || ||||| ||| ||||| Sbjct 187261 CTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTT 187202 Query 44254 CTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCG 44312 ||| | |||| | ||||||||| || |||||||||| || || ||||| || | Sbjct 187201 GGCCTTGAC-GTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCGG 187143 Query 44313 TGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||||||||||||||| ||||| Sbjct 187142 TCAGGGTCTTCACGAAGATCTGCAT 187118 >seq1424 Length=2309046 Score = 141 bits (156), Expect = 7e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||| | || ||||| || || || |||||| || ||||||||||| Sbjct 23436 CATACCACCTCTCAGACGCAGGACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATC 23495 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || ||||||||||| || |||||||| | | |||||| |||| Sbjct 23496 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGG 23555 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | |||||||| ||| ||||| ||| | | | |||||||| || ||| Sbjct 23556 AGGGATGCCTTCCTTATCCTGGATCTTGGCCTTTACATTCTCGATGGTGTCACTGGGTTC 23615 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| |||| || || ||||| || || ||||||||||||||||||||||| Sbjct 23616 CACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCAT 23666 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || ||||| || || || ||| || || |||||||| || Sbjct 22980 CATACCGCCCCTCAGACGCAGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAGTC 23039 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || |||||||| || || |||||||| | | |||||| || | Sbjct 23040 AGAAAGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGG 23099 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | ||||||||| ||| ||||| ||||| | | |||||||| || ||| Sbjct 23100 AGGAATACCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTC 23159 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| |||| || || ||||| || || ||||||||||||||||| ||||| Sbjct 23160 CACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 23210 Score = 120 bits (132), Expect = 2e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || ||||| || || || |||||| || ||||||||||| Sbjct 23208 CATACCGCCCCTCAGACGCAGGACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATC 23267 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || |||||||| || || |||||||| | | |||||| |||| Sbjct 23268 AGAAAGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGG 23327 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||||| ||| ||||| ||||| | | |||||||| | || Sbjct 23328 GGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTTGGCTC 23387 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| | || || ||||| || || ||||||||||||||||| ||||| Sbjct 23388 CACCTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 23438 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | | ||||| || || || ||| || || ||||||||||| | Sbjct 22756 CCACCCCTCAGACGTAGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAA 22815 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || |||||||| || || |||||||| | | |||||| |||| ||| Sbjct 22816 AGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAGATAAGCCTCTGCTGGTCTGGAGGG 22875 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | |||||||| ||| ||||| ||||| | | |||||||| || |||||| Sbjct 22876 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCACT 22935 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || || ||||| || || |||||||||||||| || ||||| Sbjct 22936 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCAT 22982 >seq1689 Length=2064527 Score = 98.7 bits (108), Expect = 7e-16 Identities = 155/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC-GGCGAGTTGGCG 44178 ||||||||||| || ||||| ||| ||||||||| ||| ||||||| | | || | | Sbjct 174754 AGTCTCAACACGAGATGAAGAGTGGACTCCTTTTGAATGCTGTAATCAGACAAGGT-ATG 174812 Query 44179 CTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTC 44238 | || ||||| ||||| || |||||||||| | ||||||| | ||| | ||||| Sbjct 174813 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATGAGGAGGAATTCCTTC 174872 Query 44239 CTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGT 44298 ||| | | ||||| ||| | |||||| || || || ||| ||||| | || Sbjct 174873 CTTATTCTGGATCTTGGCCTTTATATCTCCTATTGTATCCAAGGCTTCAACCTCGAGAGT 174932 Query 44299 AATCGTCTTTCC-CGTGAGGGTCTTCACGAAGATTTGC 44335 ||| ||||| || || ||||| |||| ||| || ||| Sbjct 174933 AATGGTCTTCCCTTGTAAGGGTTTTCAAGAAAATCTGC 174970 >seq2201 Length=851120 Score = 82.4 bits (90), Expect = 5e-11 Identities = 136/194 (70%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204 ||| || || ||||||| | || | || || ||| | || ||||||||||||| ||| | Sbjct 771259 CTCTTTCTGCCTGTTGTAGTTGGACAAGGTG-CGCCCATCTTCCAGCTGCTTCCTGGCGA 771201 Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264 ||||| | ||| | ||| | | | ||||| || || ||||| ||| | Sbjct 771200 AGATCGGCCTCTGTTCATCAGGGGAGATGCCTTCTTTGTCTTGGATCTTGGCCTTGACGT 771141 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 | || ||||||||| || |||||||||| | || ||||| | || | |||||||| Sbjct 771140 TCCCGATGGTGTCGCTGGGCTCCACCTCCAGGGCGATGGTCTTCTCGGTCAAGGTCTTCA 771081 Query 44325 CGAAGATTTGCATG 44338 ||||||| |||||| Sbjct 771080 CGAAGATCTGCATG 771067 >seq1 Length=8996366 Score = 82.4 bits (90), Expect = 5e-11 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCG 44178 ||||||||| | || ||||| || ||||||||| |||| ||| || | | || | | Sbjct 4848829 AGTCTCAACGCAAGATGAAGAGTAAACTCCTTTTGAATGTGGTAGTCAGACAAGGTA-CA 4848771 Query 44179 CTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTC 44238 | | || |||| ||||| || ||||||||||| ||||| || ||||| | ||||| Sbjct 4848770 CCCATCTTCCAATTGCTTGCCAGCAAAGATCAATACTTGCTGGTCAGAAGGAATTCCTTC 4848711 Query 44239 CTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGT 44298 ||||||| ||||| ||| | || |||| || | | ||| | ||| | | Sbjct 4848710 CTTTTCCTGGATCTTGGCCTTTACATTTTCTATTGTAACCAAAGCTTCAATCTCGAGAAT 4848651 Query 44299 AATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | |||||||| || || || |||| ||| || ||||| Sbjct 4848650 GACGGTCTTTCCGGTAAGAGTTTTCAAGAAAATCTGCAT 4848612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359979475416330