Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_033176.1
Length=224064
Score E
Sequences producing significant alignments: (Bits) Value
seq2035 192 8e-44
seq1806 132 7e-26
>seq2035
Length=3963056
Score = 192 bits (212), Expect = 8e-44
Identities = 180/229 (79%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 9256 GTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGAACATCGCACACC 9315
||||||||||| |||||||| |||||||||||| || ||||| || ||||| |||||
Sbjct 596361 GTCTGGAACAGACGCTCGTCATCCCATTCTGGATGCTCCTGTTTAAGCACATCACACACT 596420
Query 9316 CTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGTACCAGGCCAAAA 9375
||||| || || | ||||| || |||||||||||||| || ||||| |||||||||||
Sbjct 596421 CTGTTATGCTCTCGCAGCCAAATCGTGGCGTACATCATCAGACCAGGCACCAGGCCAAAC 596480
Query 9376 GCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9435
|||| || || ||||| || |||| || ||| || | | || ||||||||||| | |
Sbjct 596481 ACCTCCTGCCCCACAGCAAGCCGCAGGTGTTCAGGGATGTGAGGGGGATAGATCATCTCC 596540
Query 9436 ACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATCT 9484
||||| |||||||| | ||| |||||||| || || ||||| ||||
Sbjct 596541 ACCTGACTATCTTTGACTGTGGGAGGATACATCTCTCCATCAATTATCT 596589
Score = 122 bits (134), Expect = 1e-22
Identities = 196/282 (70%), Gaps = 0/282 (0%)
Strand=Plus/Plus
Query 8303 GGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCG 8362
||||| || || || || | |||| ||||||||||| | ||| | |||| |||
Sbjct 594786 GGACAACCTTTCACATTATTGCAGATGAGAGACTGAATTGAGGCGGTGTTGATGATTTTA 594845
Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422
|| || || ||||| || || ||||| ||||||||||| || || || || ||
Sbjct 594846 AAGCCTACTTCTCCACCAAAAGTGCTAGGCTTCCAGTAGTGAGGAGAACATATAGGATTA 594905
Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482
|||| || ||||| | |||||| || || || | || | || ||||||| ||||||
Sbjct 594906 CCCATAAGTCCTTTCAAGGAGAAAGGTGCTCCAACTTCTACCATAGTCTCACCAAAGATG 594965
Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCT 8542
|| | ||||| |||||||| |||| | | | |||||||||| || || | |||
Sbjct 594966 GCATCTGGACGAGGCTTTTCAACCAGAAGGGCAGGATACAGCTCCATGGCATCAATGTCA 595025
Query 8543 CCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCT 8584
|| ||||| || | || ||||| || ||||| ||||||
Sbjct 595026 CCATAAAGTGCTTCTAACTCCGCAGCCATTTCCTTCTCTCCT 595067
Score = 118 bits (130), Expect = 2e-21
Identities = 121/158 (77%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 9649 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 9708
|||||||||||| ||||||||||| || || || || |||||| ||| ||| | ||
Sbjct 596933 TCTTACCCCATGACCCAGTCCTTTGGTAAAAGCTGGTCCTCGCTTATGATCTGTCTTGAA 596992
Query 9709 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 9768
||| || || |||||||| ||| |||| || |||||||| || || ||||||||||||||
Sbjct 596993 AAATTGATGGGTGAAATGCTGGGCAAAGAATGCAAACATCAAATTTGTGCCCTGGGGATC 597052
Query 9769 GGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAA 9806
|| | || | || | || ||| |||||||||||
Sbjct 597053 AGGGATAAACTTTCTTCTTAGGAGAAATTTTTCCACAA 597090
Score = 98.7 bits (108), Expect = 1e-15
Identities = 113/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967
|||||||| || || | | |||||| || |||| || || || || |||| || |
Sbjct 597516 TCACCTTTCACACCCATGGCAGTTGGGCAGTCGTCAGCCACAGGGGGAAGAACTCTGGTA 597575
Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027
|||||||||||||| || || |||||||||||| ||| | |||| || || || |
Sbjct 597576 TAATAGGAGAGATTAGAAAAGGCTTCCCAGCTTTTGTAGCCATAGTGTGCATTATAAGTT 597635
Query 10028 GGAGGGCTGTCAATCAAATCGGATCTACCTGA 10059
|| ||||||||||||| ||| ||||| ||||
Sbjct 597636 GGTGGGCTGTCAATCAGATCTGATCTGGCTGA 597667
>seq1806
Length=1669630
Score = 132 bits (146), Expect = 7e-26
Identities = 171/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 8349 TCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGG 8408
||||||| || ||| |||| || || || || ||||| | |||||||||| |||| |
Sbjct 62039 TCTTGACAATGTTGAAGCCCATCTCGCCACCAAATGTGCTTGACTTCCAGTACTCCGGAG 62098
Query 8409 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGC 8468
| |||||| |||| | | |||||| |||||||| || || ||||| | || | || |
Sbjct 62099 AACAGATGGGGTTCCCTAAGAGGCCCTTGAGGGAAAAGGGGGCCCCAATTTCTATCATAC 62158
Query 8469 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCA 8528
|||| || ||||||| ||| ||| || ||| || | | || ||| | ||| | |||||
Sbjct 62159 TCTCCCCAAAGATGGAGTTTGGATGGCACTTCTCAAGAAGGAGTCCTGGGTAGAACTCCA 62218
Query 8529 CAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCT 8584
|| |||| |||||| || || || | || || || |||||||||||||||
Sbjct 62219 AGGCATCGATGTCTCCATACAGTTCCTCCAACTCAGCTGCCATCTCCTTTTCTCCT 62274
Score = 91.5 bits (100), Expect = 2e-13
Identities = 118/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291
|| ||||||| |||||| || | |||||||| || |||||||| | ||| || ||
Sbjct 69194 TCACCGATAAGGATGAGGCGGGCCGTCTGGAAGAGCTGCTCGTCGCCCCAGGTGGGGTGC 69253
Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351
|| |||| | || ||||| | |||||| || | ||||||| ||||| || | |
Sbjct 69254 TCAGCCTTCAACAGGTCACACACGCGGTTGTGCTCACGCAGCCAGAGCGTGGCATAGAGC 69313
Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCA 9394
||||||||||| | |||||| || |||| || || || ||||
Sbjct 69314 ATGAGCCCAGGAAGCAGGCCGAACACCTCCTGGCCCACTGCCA 69356
Score = 91.5 bits (100), Expect = 2e-13
Identities = 104/138 (75%), Gaps = 4/138 (3%)
Strand=Plus/Plus
Query 9650 CTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCC--TCGCGCCAAATCAGTCCTAA 9707
||||||||||| |||| | || |||||| | ||||| || |||| | ||| | |
Sbjct 70316 CTTACCCCATGGCCCAAGGCCTTGGTGAAGCCAGGGCCCATCTTGCCAGA--AGTTTTGA 70373
Query 9708 AAAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGAT 9767
| |||||||| ||||| ||||| |||| ||||||||||| | ||||| ||| ||||| |
Sbjct 70374 AGAACTGGTGGGTGAAGTGTTGTGCAAAGAAGGCAAACATGAGGTTGGCGCCTTGGGGGT 70433
Query 9768 CGGGAGTGAAGGTCCTCC 9785
|||| |||| |||||
Sbjct 70434 CGGGTATGAACTCCCTCC 70451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716854487209600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |