Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1424 158 3e-33 seq2363 150 4e-31 seq1767 127 5e-24 seq54 105 2e-17 seq2080 102 2e-16 seq2201 98.7 2e-15 seq1958 93.3 1e-13 >seq1424 Length=2309046 Score = 158 bits (174), Expect = 3e-33 Identities = 175/233 (75%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969 |||| ||||||| |||| |||||||| || || || || || || |||||||| || | Sbjct 23674 AGGTCAAAATGC---AAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAG 23618 Query 177970 TGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCC 178029 ||||| | |||||||||||||| || || ||||| ||||| || ||||| |||| Sbjct 23617 TGGAACCCAGTGACACCATCGAGAATGTAAAGGCCAAGATCCAGGATAAGGAAGGCATCC 23558 Query 178030 CTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG 178089 |||| |||||||| | || ||||| || || || ||||| |||||||| | |||||| Sbjct 23557 CTCCAGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTT 23498 Query 178090 CCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 | ||||| ||| | || || || || || |||||||| || || | || ||| Sbjct 23497 CTGATTACAACATTCAGAAGGAGTCGACCCTGCATCTGGTCCTGCGTCTGAGA 23445 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || || || || || || |||||||| || |||||| | ||| Sbjct 22979 CAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAACCCAGTGAC 22920 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||| || || ||||| ||||| || ||||| |||||||| |||||||| Sbjct 22919 ACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCAGACCAGCAG 22860 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | |||||||| || || |||||||| || ||||| | |||||| | ||||| ||| | Sbjct 22859 AGGCTTATCTTTGCAGGCAAACAGCTGGAGGATGGCCGCACTCTTTCTGATTACAACATT 22800 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || ||||| || || |||||||| || Sbjct 22799 CAGAAAGAGTCGACCCTGCATCTGGT 22774 >seq2363 Length=646923 Score = 150 bits (166), Expect = 4e-31 Identities = 167/221 (76%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || |||||||| |||||||| || ||| Sbjct 186446 CAGATCTTCGTGAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGA--GCCCAGCG 186503 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||||||||| ||||| |||||||| || || ||||| || ||||||| Sbjct 186504 ACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGC 186563 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| |||||||| ||||| ||||| || | || || |||| || ||| Sbjct 186564 AGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGACGGCCGCACCCTGTCCGACTACAACA 186623 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| || || || || ||||| || || | | |||||| Sbjct 186624 TCCAGAAGGAGTCCACCCTGCACCTGGTCCTCCGTCTCAGA 186664 Score = 150 bits (166), Expect = 4e-31 Identities = 167/221 (76%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || |||||||| |||||||| || ||| Sbjct 186893 CAGATCTTCGTGAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGA--GCCCAGCG 186950 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||||||||| ||||| |||||||| || || ||||| || ||||||| Sbjct 186951 ACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGC 187010 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| |||||||| ||||| ||||| || | || || |||| || ||| Sbjct 187011 AGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGACGGCCGCACCCTGTCCGACTACAACA 187070 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| || || || || ||||| || || | | |||||| Sbjct 187071 TCCAGAAGGAGTCCACCCTGCACCTGGTCCTCCGTCTCAGA 187111 Score = 149 bits (164), Expect = 2e-30 Identities = 159/208 (76%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || |||||||| |||||||| || ||| Sbjct 187682 CAGATCTTCGTGAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGA--GCCCAGCG 187739 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||||||||| ||||| || ||||| ||||| ||||| || ||||||| Sbjct 187740 ACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCTGACCAGC 187799 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| |||||||| ||||| ||||| || | || || |||| || ||| Sbjct 187800 AGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGACGGCCGCACCCTGTCCGACTACAACA 187859 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || ||||| || || Sbjct 187860 TCCAGAAGGAGTCCACCCTGCACCTGGT 187887 Score = 147 bits (162), Expect = 5e-30 Identities = 155/202 (77%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || |||||||| |||||||| || ||| Sbjct 187121 CAGATCTTCGTGAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGA--GCCCAGCG 187178 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||||||||| ||||| |||||||| || || ||||| || ||||||| Sbjct 187179 ACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGC 187238 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| |||||||| ||||| ||||| || | || || |||| || ||| Sbjct 187239 AGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGACGGCCGCACCCTGTCCGACTACAACA 187298 Query 178102 TCCAAAAAGAATCAACACTGCA 178123 |||| || || || || ||||| Sbjct 187299 TCCAGAAGGAGTCCACCCTGCA 187320 Score = 145 bits (160), Expect = 2e-29 Identities = 166/221 (75%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || | || || |||||||| |||||||| || ||| Sbjct 186218 CAGATCTTCGTGAAGACCCTGACGCGGAAGACCATCACCCTGGAGGTGGA--GCCCAGCG 186275 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||||||||| ||||| |||||||| || || ||||| || ||||||| Sbjct 186276 ACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGC 186335 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| |||||||| ||||| ||||| || | || || |||| || ||| Sbjct 186336 AGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGACGGCCGCACCCTGTCCGACTACAACA 186395 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| || || || || ||||| || || | | |||||| Sbjct 186396 TCCAGAAGGAGTCCACCCTGCACCTGGTCCTCCGTCTCAGA 186436 Score = 145 bits (160), Expect = 2e-29 Identities = 159/208 (76%), Gaps = 5/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || |||||||| |||||||| || ||| Sbjct 186674 CAGATCTTCGTGAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGA--GCCCAGCG 186731 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||||||||| ||||| |||||||| || || ||||| || ||||||| Sbjct 186732 ACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGC 186791 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| |||||||| ||||| ||||| || | || || |||| || ||| Sbjct 186792 AGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGACGGCCGCACCCTGTCCGACTACAACA 186851 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || ||||| || || Sbjct 186852 TCCAGAAGGAGTC-ACCCTGCACCTGGT 186878 Score = 145 bits (160), Expect = 2e-29 Identities = 166/221 (75%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || |||||||| |||||||| || ||| Sbjct 187454 CAGATCTTCGTGAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGA--GCCCAGCG 187511 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||||||||| ||||| |||||||| || || ||||| || ||||||| Sbjct 187512 ACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGC 187571 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| |||||||| ||||| ||||| || | || || |||| || ||| Sbjct 187572 AGAGGTTGATCTTTGCCGGAAAGCAGCTGGAAGACGGCCGCACCCTGTCCGACTACAACA 187631 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| || || || || ||||| || || | | |||||| Sbjct 187632 TCCAGAAGGAGTCTACCCTGCACCTGGTCCTCCGTCTCAGA 187672 >seq1767 Length=1785757 Score = 127 bits (140), Expect = 5e-24 Identities = 159/214 (74%), Gaps = 3/214 (1%) Strand=Plus/Minus Query 177927 ATTTTCGTGAAAACTC-TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACAC 177985 |||||||||||||| | | ||||| || || |||| || ||||| ||| ||| | || Sbjct 524010 ATTTTCGTGAAAACCCTTAACAGGGAAGACCTTCACTCTTGAGGTTGAACCCTCGGTTAC 523951 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 || || || || || ||||| ||||| || |||||||| ||||| || |||| | | Sbjct 523950 AATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCGAAG 523891 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCC 178104 ||| ||||| || | ||||| | ||||||||| | || |||| | || || ||| | | Sbjct 523890 ACTGATCTTTGCTGACAAACAATTGGAAGATGGATGTAC-CTTGTCTGACTACAACATTC 523832 Query 178105 AAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 |||| || || || || |||||||| |||||||| Sbjct 523831 AAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 523798 >seq54 Length=460634 Score = 105 bits (116), Expect = 2e-17 Identities = 146/201 (73%), Gaps = 5/201 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || || || || || || ||||| ||| |||| | || ||| Sbjct 180323 CAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACACTCAAGGTCCA--GC-CAGTG 180379 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||||||||| || |||||| || || || ||||| || || || || || ||||||| Sbjct 180380 ACACCATCGAAAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATTCCACCTGACCAGC 180439 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | ||||| ||||| | || |||||||| || |||| | ||||| | || ||||| Sbjct 180440 AGCGACTGATCTTTGTGGGCAAACAGCTGGAGAATGGCTGCACTCTCTCAGACTATAATA 180499 Query 178102 TCCAAAAAGAATCAACACTGC 178122 | |||||||| || || |||| Sbjct 180500 TTCAAAAAGAGTCCACCCTGC 180520 >seq2080 Length=3818131 Score = 102 bits (112), Expect = 2e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| ||||| ||||||||||| ||||| || |||||| | || ||||| || || || Sbjct 1111657 AAGATCCAGGATAAAGAAGGAATTCCTCCTGATCAGCAAAGGCTGATCTTTGCTGGCAAG 1111716 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 || || ||||||||| ||||| | || || || | ||||| || || || || ||| Sbjct 1111717 CAACTGGAAGATGGACATACTCTATCTGACTACGACATTCAAAAGGAGTCCACTCTTCAT 1111776 Query 178125 CTTGTTTTGAGACT 178138 ||||| |||||||| Sbjct 1111777 CTTGTGTTGAGACT 1111790 >seq2201 Length=851120 Score = 98.7 bits (108), Expect = 2e-15 Identities = 145/201 (72%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || | || | || || ||| |||| |||||||| || ||| Sbjct 771071 CAGATCTTCGTGAAGACCTTGACCGAGAAGACCATCGCCCTGGAGGTGGA--GCCCAGCG 771128 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||| ||||||||| ||||| || ||||||||||| ||| | || || | | Sbjct 771129 ACACCATCGGGAACGTCAAGGCCAAGATCCAAGACAAAGAAGGCATCTCCCCTGATGAAC 771188 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAAC 178100 | | | ||||||||| | || ||||| |||||||| | || |||| || | || ||| Sbjct 771189 AGAGGCCGATCTTCGCCAGGAAGCAGCTGGAAGATGGGCGCAC-CTTGTCCAACTACAAC 771247 Query 178101 GTCCAAAAAGAATCAACACTG 178121 || ||||| || || ||| Sbjct 771248 AGGCAGAAAGAGTCTACTCTG 771268 >seq1958 Length=4156293 Score = 93.3 bits (102), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 3/217 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| || || || || || ||||| ||| ||| ||| ||| || Sbjct 632934 CAGATTTTCGTGAAAACCCTTACTGGGAAGACCATCACTCTCTAGGCTGAACCCTCGGAT 632993 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || | ||| | ||||| || |||||||| |||| || | |||| Sbjct 632994 ACAATAGAAAATGTAGAGGCCAAGTTCCAGGATAAGGAAGGAATTCCTCTTGATCGGCAA 633053 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGAT-GGAAGGAC--TCTTGCCGATTATAAC 178100 |||| ||||| || || || | || ||| || || | || | | | || || || Sbjct 633054 AGACTGATCTTTGCTGGCAAGTAACTGGAAAATAAGATGTACTTTGTAGTCGGCTACAAT 633113 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGAC 178137 | ||||| || || || || |||||||| ||||||| Sbjct 633114 ATTCAAAAGGAGTCCACTCTTCATCTTGTATTGAGAC 633150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203692797213060