Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sorex_20araneus_20[refseq_20GCF_5F000181275.1_202012-08-27] 12,845 sequences; 2,423,158,183 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq61 111 1e-19 >seq61 Length=12918418 Score = 111 bits (122), Expect = 1e-19 Identities = 123/163 (75%), Gaps = 1/163 (1%) Strand=Plus/Minus Query 22740 ACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCAT 22799 |||| || |||| |||||||| || ||||| || | |||||||| || ||||| | || Sbjct 2373775 ACGTGTCCTGGCTTTTGCGGCAGTGGAAGGGATCTTCTTTTCTGGCTCGTTTGCATCGAT 2373716 Query 22800 ATTCTGGCTGAAGAAACGTTCG-CTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTA 22858 |||||||||||| ||| | | || ||||| || | | |||||||| || | |||| Sbjct 2373715 ATTCTGGCTGAAAAAAAGGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATTA 2373656 Query 22859 GCCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGtt 22901 || | || || ||| | ||||||||||||||||| || |||| Sbjct 2373655 GCAGGGATGAGGGTTTCCACTGTGACTTTGCTTGCCTGATGTT 2373613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356177832186535