Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sorex_20araneus_20[refseq_20GCF_5F000181275.1_202012-08-27] 12,845 sequences; 2,423,158,183 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq40 107 2e-18 >seq40 Length=19741185 Score = 107 bits (118), Expect = 2e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933 || ||||| || ||||| || | || |||||||| |||||||| |||| |||||||| Sbjct 7972817 GGTTACCTGGGTTGCCAAGCCTTGTCAGAGATGATCCAGTTTTATCTGGAGAAGGTGATG 7972876 Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993 || ||||| || || || | || |||||||| ||||| || ||||| | ||||||||| Sbjct 7972877 CCCCAGGCTGAGAACCAAAGTCCAGACATCAAGGAGCATGTGAACTCCTTAGGAGAAAAG 7972936 Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTG 129025 | || || || | || | ||||||||||| Sbjct 7972937 TTGAAGACCCTCAGGCTGAGTCTGCGTCGCTG 7972968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447678508076400