Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sorex_20araneus_20[refseq_20GCF_5F000181275.1_202012-08-27] 12,845 sequences; 2,423,158,183 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq40 96.9 3e-15 >seq40 Length=19741185 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| |||| |||||||| ||||| || || || |||| ||||| ||||| Sbjct 7972826 GGTTGCCAAGCCTTGTCAGAGATGATCCAGTTTTATCTGGAGAAGGTGATGCCCCAGGCT 7972885 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || || || | || ||||| || || || || || ||| | || |||||| ||||||| Sbjct 7972886 GAGAACCAAAGTCCAGACATCAAGGAGCATGTGAACTCCTTAGGAGAAAAGTTGAAGACC 7972945 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 | || || | ||||||||||| Sbjct 7972946 CTCAGGCTGAGTCTGCGTCGCTG 7972968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429987075655640