Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sorex_20araneus_20[refseq_20GCF_5F000181275.1_202012-08-27] 12,845 sequences; 2,423,158,183 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq19 118 7e-22 >seq19 Length=29725166 Score = 118 bits (130), Expect = 7e-22 Identities = 126/165 (76%), Gaps = 1/165 (1%) Strand=Plus/Plus Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550 || ||||| |||| || |||||||| ||||| ||| |||||||||| ||||| ||||| Sbjct 5420998 AGACCGGTGACGTGTGCGATCATGTAGGTGAGTAGAGAGTAGCTGGCAATGTTGAAGGGC 5421057 Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610 || || | |||||||| || ||||||||||| ||||| || |||||||| ||| Sbjct 5421058 ACGCCCAGGCCCATGTCTCCT-GACCTCTGGTACAGCTGGCAGGAGAGCTCACCGTTCAC 5421116 Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAG 25655 ||| || ||||| || | || || ||| ||||| || || || || Sbjct 5421117 CACATAGAACTGGCAAAGGGCGTGGCATGGAGGTAGGGCCATGAG 5421161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340084351990185