Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sorex_20araneus_20[refseq_20GCF_5F000181275.1_202012-08-27] 12,845 sequences; 2,423,158,183 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq28 93.3 8e-14 >seq28 Length=26224161 Score = 93.3 bits (102), Expect = 8e-14 Identities = 103/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || || ||| |||| |||||| | || || || || || ||||||||||| |||| || Sbjct 21882683 GGGGAAAGGGTGGTGGCCTTTGCTGCTGTTGAAGGAATTTTCTTCTCGGGATCCTTTGCT 21882742 Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814 | || || ||||| ||| | | |||| | ||||| ||||||||||| || || ||||| Sbjct 21882743 GCTATTTTTTGGCTAAAGAAAAGAGGTCT-TATGCCTGGACTCACCTTTTCCAATGAACT 21882801 Query 42815 CATCAGCAGGGACGA 42829 ||||||||| || || Sbjct 21882802 CATCAGCAGAGATGA 21882816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944187574537200