Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sorex_20araneus_20[refseq_20GCF_5F000181275.1_202012-08-27] 12,845 sequences; 2,423,158,183 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq19 111 1e-19 >seq19 Length=29725166 Score = 111 bits (122), Expect = 1e-19 Identities = 121/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 ||||| || || || || | ||| || || | || || |||||||||||||| || || Sbjct 5420998 AGACCGGTGACGTGTGCGATCATGTAGGTGAGTAGAGAGTAGCTGGCAATGTTGAAGGGC 5421057 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 || |||| ||||||||||| |||||||| |||||||| ||||| |||||||||| | Sbjct 5421058 ACGCCCAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGAGAGCTCACCGTTCACC 5421117 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCAT 20397 ||||| || || || | ||| || || || || ||||| Sbjct 5421118 ACATAGAACTGGCAAAGGGCGTGGCATGGAGGTAGGGCCAT 5421158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441301932079800