Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sorex_20araneus_20[refseq_20GCF_5F000181275.1_202012-08-27] 12,845 sequences; 2,423,158,183 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq40 93.3 5e-14 >seq40 Length=19741185 Score = 93.3 bits (102), Expect = 5e-14 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 10080 AGCTGCAGGAAAAAGGAATTTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTACA 10139 |||| || || |||||| | |||||||||||||| ||||||||||| || || ||||||| Sbjct 7975078 AGCTCCAAGAGAAAGGAGTCTACAAAGCCATGAGCGAATTTGACATCTTCATCAACTACA 7975137 Query 10140 TAGAAGCATACATGACAAT 10158 ||||||| ||||| ||||| Sbjct 7975138 TAGAAGCCTACATTACAAT 7975156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552628054408800