Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sorex_20araneus_20[refseq_20GCF_5F000181275.1_202012-08-27] 12,845 sequences; 2,423,158,183 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq119 87.8 3e-12 >seq119 Length=4927305 Score = 87.8 bits (96), Expect = 3e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| || || | |||||| || ||||||| ||| || || || || | Sbjct 3064590 CCTGCTTCCAGCCATAGAAGTGCATACTAGTGAGTTTGCCATAGTTCGGCTCAGCAATAT 3064531 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAA 204029 | ||||||| |||||||||||| || ||||||| | | || || ||||| |||| || Sbjct 3064530 GGATGTTCAAAGACTGGCTTTGATCAATGAAAGCTCCTCTGTCAGCTGCCATCTTGAGAA 3064471 Query 204030 TGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 || ||||| || || |||||||| ||||| Sbjct 3064470 CTGTTTTCTGTGATATTTCCCACACGGTCTT 3064440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795027527893200