Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sorex_20araneus_20[refseq_20GCF_5F000181275.1_202012-08-27] 12,845 sequences; 2,423,158,183 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq21 132 2e-25 seq13 132 2e-25 seq16 123 1e-22 seq107 116 1e-20 seq134 109 2e-18 seq29 107 8e-18 seq39 102 3e-16 seq4 100 1e-15 seq69 98.7 4e-15 seq1 98.7 4e-15 seq57 96.9 1e-14 seq5 87.8 7e-12 seq10 84.2 9e-11 >seq21 Length=29177037 Score = 132 bits (146), Expect = 2e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || || || || ||||| ||||| || || ||| | || Sbjct 16234864 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACTATCACTCTCGAGGTCGAACCCTCG 16234805 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | | || || || || ||||||||||||||||| ||||||||| Sbjct 16234804 GATACGATAGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGAATTCCACCTGATCAA 16234745 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || || | || |||||||||||||||||| | |||||| | || || || Sbjct 16234744 CAGAGATTGATCTTTGCTGGTAAACAACTTGAAGATGGACGTACTTTGTCTGACTACAAC 16234685 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 || | ||||| | || ||||| | || || ||||| Sbjct 16234684 ATCCAAAAGGAGTCCACTCTTCATCTCGTTTTGAGACT 16234647 >seq13 Length=31987310 Score = 132 bits (146), Expect = 2e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || || || || ||||| ||||| || || ||| | || Sbjct 25852717 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACTATCACTCTCGAGGTCGAACCCTCG 25852658 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | | || || || || ||||||||||||||||| ||||||||| Sbjct 25852657 GATACGATAGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGAATTCCACCTGATCAA 25852598 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || || | || |||||||||||||||||| | |||||| | || || || Sbjct 25852597 CAGAGATTGATCTTTGCTGGTAAACAACTTGAAGATGGACGTACTTTGTCTGACTACAAC 25852538 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 || | ||||| | || ||||| | || || ||||| Sbjct 25852537 ATCCAAAAGGAGTCCACTCTTCATCTCGTTTTGAGACT 25852500 >seq16 Length=30823778 Score = 123 bits (136), Expect = 1e-22 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || || || || ||||| ||||| || || || | || Sbjct 1301580 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACTATCACTCTCGAGGTCAAACCCTCG 1301521 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | | || || || || ||||||||||||||||| ||||||||| Sbjct 1301520 GATACGATAGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGAATTCCACCTGATCAA 1301461 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || || | || |||||||||||||||||| | |||||| | || ||||| Sbjct 1301460 CAGAGATTGATCTTTGCTGGTAAACAACTTGAAGATGGACGTACTTTGTCTGACTATAAC 1301401 Query 391230 ATTGATAAGGA 391240 || | ||||| Sbjct 1301400 ATCCAAAAGGA 1301390 >seq107 Length=6112886 Score = 116 bits (128), Expect = 1e-20 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||| || | ||||| || | || || ||||| ||||| || || ||| | || Sbjct 2236981 ATGCAGATTCTCATAAAAACCCTTATGGGAAAGACTATCACTCTGGAGGTCGAACCCTCA 2237040 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | | || || || || ||||||||||||||||||||||||||| Sbjct 2237041 GATATGATAGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAA 2237100 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || || ||| | || |||||||||||||||||| |||||| | || || || Sbjct 2237101 CAAAGATTGATCTTCGCTGGTAAACAACTTGAAGATGGACATACTTTGTCTGACTACAAC 2237160 Query 391230 AT 391231 || Sbjct 2237161 AT 2237162 >seq134 Length=4000202 Score = 109 bits (120), Expect = 2e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || | || || ||||| ||||| | || ||| | || Sbjct 2759560 ATGCAGATTTTCGTGAAAACCCTTATGGGGAAGACTATCACTCTCAAGGTCGAACCCTCG 2759501 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | | || || || || ||||||||||||||||| || |||||| Sbjct 2759500 GATACGATAGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGAATTCCACCCGATCAA 2759441 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || || | || ||||||||||||||||| | |||||| | || || | Sbjct 2759440 CAGAGATTGATCTTTGCTGGTAAACAACTTGAAGATGGGTGTACTTTGTCAGACTACCAC 2759381 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 || | ||||| | || ||||| | || || ||||| Sbjct 2759380 ATCCAAAAGGAGTCCACTCTTCATCTCGTTTTGAGACT 2759343 >seq29 Length=25414214 Score = 107 bits (118), Expect = 8e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| || || || || ||||| |||||||| || || | || Sbjct 3399181 ATGCAGATTTTTGTGAAAACCCTTACGGGGAAGACTATCACTCTTGAGGTCAAACCCTCA 3399122 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | | || || || || ||||||||||||||||| |||| ||| Sbjct 3399121 GATACGATAGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGAATTCCATCTGACCAA 3399062 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 | | || || || | || |||||||||||||||||| | |||||| | || || ||| Sbjct 3399061 TAGAGATTGATCTTTGCTGGTAAACAACTTGAAGATGGACGTACTTTGTCTGACTACAAT 3399002 Query 391230 AT 391231 || Sbjct 3399001 AT 3399000 >seq39 Length=20300788 Score = 102 bits (112), Expect = 3e-16 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426 || ||||| ||||||||||| || |||| |||||||| ||||| | |||||||||||| Sbjct 18054200 GCCACTAAGGATGCAGGACAGATATCTGGATTAAATGTGCTTCGGGTGATTAATGAACCT 18054141 Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA 451467 ||||| |||||||| || ||||| || | |||||| |||| Sbjct 18054140 ACAGCTGCTGCTCTGGCCTATGGTCTGGACAAATCAGAAGA 18054100 >seq4 Length=51989874 Score = 100 bits (110), Expect = 1e-15 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| || || || || ||||||||||| | ||| || | || Sbjct 2293665 ATGCAGATTTTTGTGAAAACCCTTACAGGGAAGACTATTACTCTCAAGGTTCAACCCTCA 2293724 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | | | | |||| ||||||||||||||||||| || ||| Sbjct 2293725 GATACAATAGAAAATGTAGAGGCCAGGGTTCAGGATAAGGAAGGAATTCCTCTTGGTCAG 2293784 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | ||| | || | || ||||||||||||| |||| |||||| | || || || Sbjct 2293785 CAAAGATTAGTCTTTGCTGGTAAACAACTTGAAGCTGGACATACTTTGCCTGACTACAAC 2293844 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 || | ||||| | || ||||| Sbjct 2293845 ATCCAAAAGGAGTCCACTCTTCA 2293867 >seq69 Length=11345371 Score = 98.7 bits (108), Expect = 4e-15 Identities = 156/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || ||||| || | || || ||||| ||||| || || ||| | || Sbjct 5551960 ATGTAGATGTTTGTGAAAACCCTTTCGGGGAAGACTATCACTCTGGAGGTCGAACCCTCG 5552019 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | | || || | || ||||| |||||||||| || |||||| Sbjct 5552020 GATACAATAGAAAATGTCAAGGCCAAGTTCCAGGATAAAGAAGGAATTCAACCCGATCAA 5552079 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || ||||| | || |||||||||||||||||| | ||||| | || || || Sbjct 5552080 CAGAGATTGATTTTTGCTGGTAAACAACTTGAAGATGGATGTGCTTTGTCTGACTACAAC 5552139 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | | ||| | || ||||| | || || ||||| |||| Sbjct 5552140 ATCCAAAGGGAGTCCACTCTTCATCTCGTTTTGAGACTTCGAGG 5552183 >seq1 Length=60238417 Score = 98.7 bits (108), Expect = 4e-15 Identities = 154/219 (70%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| |||| || | || || ||||| ||||| | |||||| | || Sbjct 48537807 ATGGAGATTTTCGTAAAAATCCTTATGGGGAAGACTATCACTCTCAAGGTTGAACCCTCA 48537748 Query 391110 GATAACATT-GAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| ||| | | | | || || || || |||||||||||||||| ||| ||||| Sbjct 48537747 GATACAATTCGTAAATTTCAAGGCCAAGATCCAGGATAAGGAAGGAATTCTTCCCGATCA 48537688 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||| | || || || | || |||||||||||||||| | | | |||| | || || | Sbjct 48537687 ACAAAGATTGATCTTTGCTGGTAAACAACTTGAAGATGAATGTAATTTGTCTGACTACAT 48537628 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 || | ||||| | || | ||| | | |||||||| Sbjct 48537627 CATCCAAAAGGAATCCACTCCTCATCTCATTTTAAGACT 48537589 >seq57 Length=13814656 Score = 96.9 bits (106), Expect = 1e-14 Identities = 148/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 391058 TTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACAT 391117 |||| | ||||| || | || || ||||| ||||| || || ||| | | |||| | | Sbjct 7965522 TTTCATGAAAACCCTCATGGGGAAGACTATCACTCTCGAGGTCGAACCCTTGGATA-CGT 7965580 Query 391118 TGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTT 391177 ||| | | || || || || ||||||||||||||||| || |||||||| | | Sbjct 7965581 AGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGAATTCCACCCGATCAACAGAGATG 7965640 Query 391178 AATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAA 391237 || || | || |||||||||||||||||| | |||||| | || || | || | || Sbjct 7965641 GATCTTTGCTGGTAAACAACTTGAAGATGGACGTACTTTGTCTGACTACAGCATCCAAAA 7965700 Query 391238 GGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | || ||||| | || || ||||| Sbjct 7965701 GGAGTCCACTCTTCATCTCGTTTTGAGACT 7965730 >seq5 Length=50938590 Score = 87.8 bits (96), Expect = 7e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || |||| || | || |||||| ||||||| || || ||| | || Sbjct 5963807 ATGCAGATTTTTGTGAAAATCCTTATGGGGAAAACTTTTACTCTCGAGGTGGAACCTTCA 5963866 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 | || || ||| | | || || || || || ||||||||||||||||| ||||| Sbjct 5963867 GTTACAATAGAAAATGTCAAGGCCAAGATCCAGGAAAAGGAAGGAATTCCTCCCAATCAA 5963926 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || || || | | |||||| ||||||||||| | ||| | | || || | Sbjct 5963927 CAAAGATTGATCTTTGCTCGTAAACAAGTTGAAGATGGACGTGCTTAGTCTGACTACTAC 5963986 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 || | ||||| | || ||||| Sbjct 5963987 ATCCAAAAGGAGTCCACTCTTCA 5964009 >seq10 Length=36298645 Score = 84.2 bits (92), Expect = 9e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 364738 TGGCACAAAATTTTGTTGGAAGTAATAATGTAAATTTACTAGAACCAAAAGGACAATTTG 364797 |||| || || ||||| ||||||||||| | ||||| || | || | || || |||| Sbjct 14301918 TGGCTCAGAACTTTGTGGGAAGTAATAACATTAATTTGCTTCAGCCTATTGGCCAGTTTG 14301859 Query 364798 GAAGTCGAGTAATGGGAGGTAAAGATTCTGCCAGCCCACGTTATATTTGGACCA 364851 ||| ||| | || ||||||||| ||||||||||||||||||||| |||| Sbjct 14301858 GAACTCGGCTTCATGGTGGTAAAGATGCTGCCAGCCCACGTTATATTTTCACCA 14301805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975393243057260