Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sorex_20araneus_20[refseq_20GCF_5F000181275.1_202012-08-27] 12,845 sequences; 2,423,158,183 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq40 104 4e-17 >seq40 Length=19741185 Score = 104 bits (114), Expect = 4e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444 |||||||| | | |||||||||| || ||||| || || ||||||||||| || | ||| Sbjct 16087856 TGGTGGTATTTTGTATCTAAAGGAATTGAATATTTGGACACAGTGTTTTTTATTTTGAGG 16087797 Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504 || || || || ||| || || || ||||||||||| | ||| |||||||| || Sbjct 16087796 AAGAAAAACAACCAAGTTTCTTTCCTTCATGTATATCATCACTGTACCATGTTTACGTTG 16087737 Query 58505 GGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 | ||| | || ||||| ||| | ||||| ||||| Sbjct 16087736 TGGTGGATTGGAATTAAGTGGGTCGCAGGGGGTCA 16087702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903266146039200