Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sorex_20araneus_20[refseq_20GCF_5F000181275.1_202012-08-27] 12,845 sequences; 2,423,158,183 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq28 89.7 1e-12 >seq28 Length=26224161 Score = 89.7 bits (98), Expect = 1e-12 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGG 131923 || || |||||| ||||||||| || ||||| || || | || |||||| |||||| Sbjct 21882695 GTGGCCTTTGCTGCTGTTGAAGGAATTTTCTTCTCGGGATCCTTTGCTGCTATTTTTTGG 21882754 Query 131924 CTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGAT 131983 || ||||| | || | |||||||||||| | || |||||| || ||||| |||||| Sbjct 21882755 CTAAAGAAAAGAGGTCTTATGCCTGGACTCACCTTTTCCAATGAACTCATCAGCAGAGAT 21882814 Query 131984 GAAG 131987 |||| Sbjct 21882815 GAAG 21882818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186617478429045