Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sorex_20araneus_20[refseq_20GCF_5F000181275.1_202012-08-27] 12,845 sequences; 2,423,158,183 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq119 86.0 8e-12 >seq119 Length=4927305 Score = 86.0 bits (94), Expect = 8e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 111278 GTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 111337 ||||| |||| | |||||| || | |||| | || || || ||||| |||| || Sbjct 3051868 GTGTATTCTACTACTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAAGTTCTGCTGA 3051809 Query 111338 TTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 111397 ||||| ||| ||||| | ||| ||||||||||||||||| || ||||| || ||||| Sbjct 3051808 TTACTTTTCCGATTGCAGGAATCTTTGTAGAGCATGTAGGGGGTACCCGTTTCTGTCTGA 3051749 Query 111398 GATTTGAGAATAGCCTTCCAAA 111419 |||| | || || | ||||| Sbjct 3051748 GATTCAATGATGGCATACCAAA 3051727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627931161612000