Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sorex_20araneus_20[refseq_20GCF_5F000181275.1_202012-08-27] 12,845 sequences; 2,423,158,183 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq40 91.5 2e-13 >seq40 Length=19741185 Score = 91.5 bits (100), Expect = 2e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 32676 TGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATAATGAGA 32735 |||| |||||| | |||||||| || |||||| | || || | || || || |||| Sbjct 16087856 TGGTGGTATTTTGTATCTAAAGGAATTGAATATTTGGACACAGTGTTTTTTATTTTGAGG 16087797 Query 32736 AAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTTACTTTA 32795 |||||| ||||||||| || | || ||||| || || | |||||||||||| || Sbjct 16087796 AAGAAAAACAACCAAGTTTCTTTCCTTCATGTATATCATCACTGTACCATGTTTACGTTG 16087737 Query 32796 GGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 | ||||| || ||||| ||| | ||||| || || Sbjct 16087736 TGGTGGATTGGAATTAAGTGGGTCGCAGGGGGTCA 16087702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603083951782800