Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sus_20scrofa_20[refseq_20GCF_5F000003025.6_202017-02-07] 613 sequences; 2,501,912,388 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 7e-16 >seq3 Length=132848913 Score = 98.7 bits (108), Expect = 7e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| || || |||||| || | ||||||||||| ||||| ||||||||||||| Sbjct 126361097 GCCTTTGCCGCCGTGGAAGGCATCTTCTTTTCTGGGTCTTTTGCATCCATATTCTGGCTC 126361038 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGA 22868 |||||||| || ||||| || || | ||||||||||| | |||||| | || || Sbjct 126361037 AAGAAACGAGGACTGATGCCTGGCCTGACCTTTTCCAACGAACTTATTAGCAGAGATGA 126360979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356230938601039