Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sus_20scrofa_20[refseq_20GCF_5F000003025.6_202017-02-07] 613 sequences; 2,501,912,388 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 9e-12 >seq3 Length=132848913 Score = 86.0 bits (94), Expect = 9e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489 || || || |||||||| || |||||||||||||| || |||||| |||| || ||| Sbjct 126361100 GTAGCCTTTGCCGCCGTGGAAGGCATCTTCTTTTCTGGGTCTTTTGCATCCATATTCTGG 126361041 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGAC 125521 |||||||| || ||||| ||||| || ||||| Sbjct 126361040 CTCAAGAAACGAGGACTGATGCCTGGCCTGAC 126361009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741053521633880