Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sus_20scrofa_20[refseq_20GCF_5F000003025.6_202017-02-07] 613 sequences; 2,501,912,388 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq9 100 2e-16 >seq9 Length=139512083 Score = 100 bits (110), Expect = 2e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| |||| |||||||| ||||| ||||| ||||| || ||||| ||||| Sbjct 67403878 GGTTGCCAAGCCTTGTCAGAGATGATCCAGTTTTACCTGGAAGATGTAATGCCGAAGGCA 67403819 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || | | | || || || || || ||||| || |||||||| || ||||||||||| Sbjct 67403818 GAGAGTGATGGGGAGGATATCAAGGAGCACGTGAACTCCCTGGGGGAGAAGCTGAAGACC 67403759 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 | || || | ||||| ||||| Sbjct 67403758 CTCAGGCTGAGGCTGCGGCGCTG 67403736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430051187090456