Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sus_20scrofa_20[refseq_20GCF_5F000003025.6_202017-02-07] 613 sequences; 2,501,912,388 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq7 149 8e-30 seq4 149 8e-30 seq2 107 2e-17 seq18 87.8 2e-11 seq14 86.0 8e-11 >seq7 Length=121844099 Score = 149 bits (164), Expect = 8e-30 Identities = 164/217 (76%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 21594025 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 21593966 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || ||||||| || |||||| || | | Sbjct 21593965 TGGTCGAGCGCTTGTTGTAATGCGCCAGCCGCGAGGCCTCGCCGC-GATGCGCTCAAAGA 21593907 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| |||||||| |||||| | Sbjct 21593906 TGTCGTTGACAAATGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGAT 21593847 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| ||||||||||| | | || |||||| Sbjct 21593846 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 21593810 Score = 149 bits (164), Expect = 8e-30 Identities = 164/217 (76%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| |||||||| ||||||||||| || | || Sbjct 21620304 GCTTGGCCAGCTCCCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGGGACGTGA 21620363 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || ||||||| || |||||| |||| | Sbjct 21620364 TGGTCGAGCGCTTGTTGTAATGCGCCAGCCGCGAGGCCTCGCCGC-GATGCGCTCGAAGA 21620422 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | ||| |||||||| |||||||| Sbjct 21620423 TGTCGTTGACAAAGGAGTTCATGATGCCCATGGCTTTGGACGAGATGCCGGTGTCGGGGT 21620482 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| ||||||||||| | | || |||||| Sbjct 21620483 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 21620519 Score = 140 bits (154), Expect = 4e-27 Identities = 152/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||||||||| ||||||||||| || | || Sbjct 20907469 GCTTGGCCAGCTCCCCCGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 20907410 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| ||| ||||||| | ||||||| |||| | Sbjct 20907409 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGCCGGCGATGCGCTCGAAGA 20907350 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| || || | Sbjct 20907349 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTATCCGGAT 20907290 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | ||||| || ||||||||||| Sbjct 20907289 GGACCTGTTTCAGCACCTTGTA 20907268 Score = 140 bits (154), Expect = 4e-27 Identities = 162/217 (75%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| |||||||| ||||||||||| || | || Sbjct 21607162 GCTTGGCCAGCTCCCCGGGCAGCAGCAG-CGCACGGCCGTCTGGATCTCCCGGGACGTGA 21607104 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || ||||||| | | ||||| || | | Sbjct 21607103 TGGTCGAGCGCTTGTTGTAATGCGCCAGCCGCGAGGCCTCGCCGGCAATGCGCTCAAAGA 21607044 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| |||||||| Sbjct 21607043 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 21606984 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| ||||||||||| | | || |||||| Sbjct 21606983 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 21606947 Score = 136 bits (150), Expect = 5e-26 Identities = 152/202 (75%), Gaps = 1/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | ||| |||||||| ||||||||||| || | || Sbjct 20789108 GCTTGGCCAGCTCCCCAGGCAGCAGCAG-CGCACGGCCGTCTGGATCTCCCGGGACGTGA 20789166 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || ||||||| | ||||||| |||| | Sbjct 20789167 TGGTCGAGCGCTTGTTGTAATGCGCCAGCCGCGAGGCCTCGCCGGCGATGCGCTCGAAAA 20789226 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | ||| |||||||| ||| |||| Sbjct 20789227 TGTCGTTGACAAAGGAGTTCATGATGCCCATGGCTTTGGACGAGATGCCGGTGTCCGGGT 20789286 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 20789287 GGACCTGCTTCAGCACCTTGTA 20789308 Score = 136 bits (150), Expect = 5e-26 Identities = 161/217 (74%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 21582148 GCTTGGCCAACTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 21582207 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || ||||||| |||| || || | | Sbjct 21582208 TGGTCGAGCGCTTGTTGTAATGCGCCAGCCGCGAGGCCTCGCCCGCGATACGCTCAAAGA 21582267 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| |||||||| Sbjct 21582268 TGTCGTTGACGAA-GAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 21582326 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| ||||||||||| | | || |||||| Sbjct 21582327 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 21582363 Score = 134 bits (148), Expect = 2e-25 Identities = 151/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| |||||||| ||||||||||| || | || Sbjct 20821463 GCTTGGCCAGCTCCCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGGGACGTGA 20821404 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 20821403 TGGTCGAGCGCTTGTTGTAATGCGCCAGCCGCGAGGCCTCACCCGCGATGCGCTCGAAGA 20821344 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | ||| |||||||| ||| |||| Sbjct 20821343 TGTCGTTGACAAAGGAGTTCATGATGCCCATGGCTTTGGACGAGATGCCAGTGTCCGGGT 20821284 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 20821283 GGACCTGCTTCAGCACCTTGTA 20821262 Score = 131 bits (144), Expect = 2e-24 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || ||| ||| | ||| |||||||| ||||||||||| || | || Sbjct 20863005 GCTTGGCCAACTCCCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGGGACGTGA 20863064 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 20863065 TGGTCGAGCGCTTGTTGTAATGCGCCAGCCGCGAGGCCTCACCCGCGATGCGCTCGAAGA 20863124 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | ||| |||||||| ||| |||| Sbjct 20863125 TGTCGTTGACAAAGGAGTTCATGATGCCCATGGCTTTGGACGAGATGCCAGTGTCCGGGT 20863184 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 20863185 GGACCTGCTTCAGCACCTTGTA 20863206 Score = 131 bits (144), Expect = 2e-24 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || ||| ||| | ||||||||| || ||||| ||||| || | || Sbjct 20898150 GCTTGGCCAACTCCCCGGGCAGCAGCAGGCGCACAGCCGTCTGAATCTCTCGGGACGTGA 20898091 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || ||||||| | ||||||| |||| | Sbjct 20898090 TGGTCGAGCGCTTGTTGTAATGCGCCAGCCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 20898031 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || || ||||||| ||| | |||| |||||||| ||| |||| Sbjct 20898030 TGTCGTTGACGAAGGAATTCATGATGCCCATGGCCTTGGACGAGATGCCAGTGTCCGGGT 20897971 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 20897970 GGACCTGCTTCAGCACCTTGTA 20897949 Score = 131 bits (144), Expect = 2e-24 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 21220176 GCTTGGCCAGCTCCCCGGGCAGCAACAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 21220235 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || ||||||| ||||||| |||| | Sbjct 21220236 TGGTCGAGCGCTTGTTGTAATGCGCCAGCCGCGAGGCCTCGCCAGCGATGCGTTCGAAAA 21220295 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| || || ||||| ||||||| ||| | |||| ||| ||||| || |||| Sbjct 21220296 TGTCATTAACGAACGAATTCATGATGCCCATAGCCTTGGAGGAAATGCCGGTATCCGGGT 21220355 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||| ||||| ||||||||||| Sbjct 21220356 GCACTTGCTTCAGCACCTTGTA 21220377 Score = 131 bits (144), Expect = 2e-24 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 21225932 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCAGTCTGGATCTCCCGGGACGTGA 21225991 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| |||| || |||| | Sbjct 21225992 TGGTCGAGCGCTTGTTGTAATGCGCCAGCCGCGACGCCTCGCCCGCGATACGCTCGAAGA 21226051 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| ||||||||||||| ||| | ||| |||||||| ||| |||| Sbjct 21226052 TGTCATTGACGAACGAGTTCATGATGCCCATGGCCTTAGAAGAGATGCCTGTGTCAGGGT 21226111 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | ||||| || ||||||||||| | | || |||||| Sbjct 21226112 GGACCTGTTTCAGCACCTTGTACACGTACACCGAGTA 21226148 Score = 129 bits (142), Expect = 7e-24 Identities = 152/205 (74%), Gaps = 7/205 (3%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCG---CGTGC 1254399 || |||||| || ||| ||| | ||| |||||||| ||||||||||| || |||| Sbjct 20842555 GCTTGGCCAACTCCCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGGGACGTGA 20842496 Query 1254400 CGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459 | ||| |||||||| | |||||||| || |||||| ||||||| |||| Sbjct 20842495 TGGTCGA----CGCTTGTTGTAATGCGCCAGCCGCGAGGCCTCACCCGCGATGCGCTCGA 20842440 Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519 ||||||||||| || |||||||||| ||| | |||| |||||||| ||||| Sbjct 20842439 AGATGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGG 20842380 Query 1254520 GGTGCACCTGCTTGAGCACCTTGTA 1254544 |||| |||||||| ||||||||||| Sbjct 20842379 GGTGGACCTGCTTCAGCACCTTGTA 20842355 Score = 102 bits (112), Expect = 1e-15 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 1254368 CAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGC 1254427 || ||||||||| ||||||||||| || | ||||||| ||||||||| | || || Sbjct 20470422 CAAGCGCACGGCCGTCTGGATCTCCCGGGACGTGATCGTGGAGCGCTTGTTGTAATGTGC 20470481 Query 1254428 CAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAC 1254487 ||| || ||||| | ||||||| |||| ||||| |||| || || ||||||| Sbjct 20470482 CAGGCGCGACGCCTCACTTGCGATGCGCTCGAAGATGTCAGTGACGAAAGAATTCATGAT 20470541 Query 1254488 CGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGAT 1254547 ||| | ||| ||||| || ||||| || || ||||| |||||||||||||| Sbjct 20470542 GCTCATGGCCTTCGAAGAGATACCTGTATCGGGATGAACTTGCTTCAGCACCTTGTAGAT 20470601 Query 1254548 G 1254548 | Sbjct 20470602 G 20470602 Score = 98.7 bits (108), Expect = 1e-14 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 ||||| || || ||| | ||||||||| || ||||||||||| | | ||| || Sbjct 20735619 GCCAGCTCCCCCGGCAGCAGCAGGCGCACAGCCGTCTGGATCTCCCTGGAAGTGATGGTC 20735678 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||| ||||| | || ||||| || ||||| | |||| || |||| |||||| Sbjct 20735679 GAGCGTTTGTTGTAATGGGCCAGGCGCGAAGCCTCACCGGCGATCCGCTCGAAAATGTCG 20735738 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 ||||| ||||| ||||||| ||| | |||| ||| || || ||| ||||| ||| Sbjct 20735739 TTGACGAACGAATTCATGATGCCCATAGCCTTGGAGGAAATACCAGTGTCCGGGTGGACC 20735798 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| || |||||||| Sbjct 20735799 TGCTTCAGTACCTTGTA 20735815 >seq4 Length=130910915 Score = 149 bits (164), Expect = 8e-30 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| ||||||||||| || | || Sbjct 99169848 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 99169789 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| ||| || ||| ||||||| |||| | Sbjct 99169788 TGGTCGAGCGCTTGTTGTAATGAGCCAGGCGGGACGCTTCGCCCGCGATGCGCTCGAAGA 99169729 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| ||| |||| Sbjct 99169728 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCCGGGT 99169669 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 99169668 GCACCTGCTTCAGCACCTTGTA 99169647 Score = 149 bits (164), Expect = 8e-30 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| ||||||||||| || | || Sbjct 99189928 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 99189869 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| ||| || ||| ||||||| |||| | Sbjct 99189868 TGGTCGAGCGCTTGTTGTAATGAGCCAGGCGGGACGCTTCGCCCGCGATGCGCTCGAAGA 99189809 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| ||| |||| Sbjct 99189808 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCCGGGT 99189749 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 99189748 GCACCTGCTTCAGCACCTTGTA 99189727 Score = 149 bits (164), Expect = 8e-30 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| ||||||||||| || | || Sbjct 99196980 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 99197039 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| ||| || ||| ||||||| |||| | Sbjct 99197040 TGGTCGAGCGCTTGTTGTAATGAGCCAGGCGGGACGCTTCGCCCGCGATGCGCTCGAAGA 99197099 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| ||| |||| Sbjct 99197100 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCCGGGT 99197159 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 99197160 GCACCTGCTTCAGCACCTTGTA 99197181 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| ||||||||||| || | || Sbjct 99218202 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 99218143 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| ||| || ||| ||||||| |||| | Sbjct 99218142 TGGTCGAGCGCTTGTTGTAATGAGCCAGGCGGGACGCTTCGCCCGCGATGCGCTCGAAGA 99218083 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| ||| || | Sbjct 99218082 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCTGGAT 99218023 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | ||||| || ||||| ||||| Sbjct 99218022 GAACCTGTTTCAGCACTTTGTA 99218001 >seq2 Length=151935994 Score = 107 bits (118), Expect = 2e-17 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| ||||| ||| | ||| ||||| || ||||| | ||| || | ||| | Sbjct 51693192 TGGCCAGCTCGCCAGGCAACAGCAGACGCACAGCTGTCTGCACCTCCCGAGACGTGATGG 51693251 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| ||||||||| ||| |||||| || ||||||| || | |||| Sbjct 51693252 TAGAGCGCTTGTTGTAGTGCGCCAAGCGGGAAGCCTCGCTGGCGATGCGCTCAAAGATGT 51693311 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || || ||||| | ||| | ||| ||||||||| |||||| || | Sbjct 51693312 CGTTGACGAAGGAATTCATTATGCCCATGGCCTTAGAAGAGATGCCCGTGTCGGGATGTA 51693371 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 | ||||| | ||| ||||| Sbjct 51693372 CTTGCTTCAACACTTTGTA 51693390 Score = 91.5 bits (100), Expect = 2e-12 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592181 TCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGG 1592240 |||| || || |||||| | |||||||| | |||| ||| || |||||| |||| | Sbjct 139944708 TCCTAGCAGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTTACATGCAAGACTGTTG 139944767 Query 1592241 CCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295 | |||||||||||||| || | || ||||| || ||||||||||| || ||||| Sbjct 139944768 CTAACATGATCAAGGGGAAAACTCCTGAGGAAATACGCAAGACCTTCAATATCAA 139944822 Score = 86.0 bits (94), Expect = 8e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||| | |||||||| | |||| ||| || |||||| |||| || ||| Sbjct 136460717 GCAGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTTACATGCAAGACTGTTGCTAAC 136460658 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295 ||||||||||| || | || ||||| || ||||||||||| || ||||| Sbjct 136460657 ATGATCAAGGGGAAAACTCCTGAGGAAATACGCAAGACCTTCAATATCAA 136460608 >seq18 Length=55982971 Score = 87.8 bits (96), Expect = 2e-11 Identities = 137/192 (71%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCG-TGCCG 1254401 || ||||||| ||||| ||| | ||| |||||||| ||||| | ||| || | || | Sbjct 6021960 GCTTGGCCAGCTCGCCAGGCAGCAGCAGACGCACGGCCGTCTGCACCTCCCGGGATGTC- 6021902 Query 1254402 ATCGTGTTGCGCTTGTTCGAGTGC---GCCAGACGGCCGGCCTCGGTGCCGATGCGGTCG 1254458 | |||| | || | ||||| | ||||| ||| |||||||| | | | || || Sbjct 6021901 AGCGTGGTTCG---GCCCGAGTACTGGGCCAGCCGGGCGGCCTCGCCGGCCAGCCGCTCA 6021845 Query 1254459 ATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCG 1254518 | || || || ||||| |||||||||| ||| | |||| |||||||| | |||| Sbjct 6021844 AACACATCATTCACAAATGAGTTCATGATGCTCATGGCCTTGGAAGAGATGCCGATGTCG 6021785 Query 1254519 GGGTGCACCTGC 1254530 |||||||||||| Sbjct 6021784 GGGTGCACCTGC 6021773 >seq14 Length=141755446 Score = 86.0 bits (94), Expect = 8e-11 Identities = 140/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | || || || ||| ||||||||| | | | || Sbjct 45761204 GCTTGGCCAGCTCCCCTGGCAGCAGCAAGCACATGGCCGTCTGGATCACCCAGGATGTGA 45761145 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || || ||||| | ||| |||| | ||||| || ||| | |||| | Sbjct 45761144 TGGTTGAGCATTTGTTGTAATGCACCAGGTGTGATGCCTCACCCCCAATGTGCTCGAAGA 45761085 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||| ||| ||||| ||||||||||| ||| | |||| |||||||| ||| |||| Sbjct 45761084 TGTTGTTAACAAAGGAGTTCATGACGCCCATGGCCTTGGATGAGATGCCAGTGTCTGGGT 45761025 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 45761024 GGACCTGCTTCAGCACCTTGTA 45761003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107088894349321