Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sus_20scrofa_20[refseq_20GCF_5F000003025.6_202017-02-07] 613 sequences; 2,501,912,388 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 2e-14 >seq1 Length=274330532 Score = 95.1 bits (104), Expect = 2e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444 |||||||||| |||||||||| || || || ||||| || |||||||| || || ||| Sbjct 86190545 TGGTGGTACTTCGTATCTAAAGGTATTGAGTATTTAGACACGGTGTTTTTTATCCTGAGG 86190604 Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504 || || || || || || || || ||||||||||| | ||| |||||||| || Sbjct 86190605 AAGAAAAACAACCAAGTCTCTTTCCTTCATGTATATCATCACTGTACAATGTTTACGTTG 86190664 Query 58505 GGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAGG 58541 | ||| | || ||||| ||| | |||| || |||| Sbjct 86190665 TGGTGGATCGGAATTAAGTGGGTCCCAGGGGGACAGG 86190701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903404277611680