Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sus_20scrofa_20[refseq_20GCF_5F000003025.6_202017-02-07] 613 sequences; 2,501,912,388 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3 82.4 9e-11 >seq3 Length=132848913 Score = 82.4 bits (90), Expect = 9e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 95168 AGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAA 95227 ||||||| |||||||| |||||||| ||| ||| || ||||||||||||||||| || | Sbjct 126359201 AGAATCCCTTTGACTTTATGGAGAATATTTCCCTGGAGGGGAAGACAAACTTCTTTGAGA 126359142 Query 95228 AGAGGGTTGGGGACTATGGCAAGATGGACG 95257 |||| || || || ||| | ||||| || Sbjct 126359141 AGAGAGTAGGCGAGTATCAGAGGATGGGCG 126359112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583256330764120