Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sus_20scrofa_20[refseq_20GCF_5F000003025.6_202017-02-07] 613 sequences; 2,501,912,388 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq12 159 4e-34 seq7 138 1e-27 seq1 138 1e-27 seq14 136 5e-27 seq15 95.1 1e-14 seq3 86.0 7e-12 seq8 82.4 9e-11 >seq12 Length=61602749 Score = 159 bits (176), Expect = 4e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| || ||||||||||| || || || ||||| ||| | | Sbjct 59172095 AATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 59172036 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||| | ||| ||||||| || || ||||| |||||||| ||||| || ||||| Sbjct 59172035 TGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCCGACCA 59171976 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | || || ||||| || ||||| || ||||||| || || || | || || || Sbjct 59171975 GCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCTGATTACAA 59171916 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || ||||| || ||||| || ||||||| | ||||| Sbjct 59171915 CATCCAGAAAGAGTCCACCCTCCATCTGGTTCTGCGTCTGAGGGGTGG 59171868 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | ||||||||||| || || || ||||| ||| | || Sbjct 59171638 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 59171579 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| ||||||| || || ||||| ||||| || ||||| || |||||| Sbjct 59171578 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGACCAG 59171519 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || || || | || || || Sbjct 59171518 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 59171459 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || |||||||| ||||| ||| | ||||| | ||||| Sbjct 59171458 ATCCAGAAAGAGTCCACTCTCCATCTGGTCCTCCGTCTGAGGGGTGG 59171412 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | ||||||||||| || || || ||||| ||| | || Sbjct 59171866 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 59171807 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| ||||||| || || ||||| ||||| || ||||| || |||||| Sbjct 59171806 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCCGACCAG 59171747 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || || || | || || || Sbjct 59171746 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 59171687 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || |||||||| ||||| || ||||||| | ||||| Sbjct 59171686 ATCCAGAAAGAGTCCACTCTCCATCTGGTTCTGCGTCTGAGGGGTGG 59171640 Score = 82.4 bits (90), Expect = 9e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 32125 ACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCA 32184 |||||| |||| | |||||||| ||||| ||| ||||| |||||| | | |||| Sbjct 22014294 ACCATTATCAATTTGGCTCAGAATTTTGTGGGTAGCAATAATCTGAACCTCTTACAGCCC 22014353 Query 32185 TCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATC 32244 ||| |||||||| ||| || | |||||||||||| |||| || | || |||||| Sbjct 22014354 ATTGGTCAGTTTGGTACCAGGTTGCATGGTGGCAAGGATTCTGCTAGTCCTCGATACATC 22014413 Query 32245 TTCAC 32249 ||||| Sbjct 22014414 TTCAC 22014418 >seq7 Length=121844099 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 6/228 (3%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| || || |||||||| || ||||| |||||||| | Sbjct 52639384 ATGCATATATTTGTGAAGACCCTGACAGGCAAGACCATCACTCTCGAGGTTGAACCCTCA 52639443 Query 27466 GATAGCATT-GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| |||| | |||| | |||||||| || ||||| ||| |||||||| || ||||| Sbjct 52639444 GATA-CATTAGAAAATGTAAAGGCTAAGATCCAGGATAAGATAGGAATTCCGCCTGACCA 52639502 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| | || | |||||||| |||||||| || |||| | ||| | ||||| | Sbjct 52639503 GCAAAGACTGACCTTTGCTGGCAAGCAACTGGAAGATGGACCTACTTT----GACTACGA 52639558 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||| |||||||||||||| || ||| | ||||| ||||| Sbjct 52639559 CACTCAAAAGGTGTCCACTCTTCATCTTGTATTGAGACTTCGTGGTGG 52639606 >seq1 Length=274330532 Score = 138 bits (152), Expect = 1e-27 Identities = 153/206 (74%), Gaps = 11/206 (5%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| |||| ||| || |||||||| || ||||| ||| | Sbjct 255801519 ATGCAGATATTTGTGAAGAGGCTGACAGGCAAGACCATCACTCTCGAG-----------T 255801471 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | |||| | || ||||| || ||||| ||||| ||||||||||| |||||| Sbjct 255801470 GATACAATAGAAAATATAAATGCTAAGATCCAGGATAAGGAAGGAATTCCTCCTGACCAG 255801411 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || || | |||||| |||||||| || |||| ||||| | | ||||| || Sbjct 255801410 CAAAGACTGATCTCTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 255801351 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 | |||||||| |||||||||||||| Sbjct 255801350 ATTCAAAAGGAGTCCACTCTTCATCT 255801325 >seq14 Length=141755446 Score = 136 bits (150), Expect = 5e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| |||||||| ||||| | || || ||||| || || || || || ||| | | Sbjct 28257960 AATGCAGATCTTTGTAAAGACCTTGACTGGTAAGACCATCACCCTGGAAGTGGAGCCCAG 28258019 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||||| ||| | |||| || ||||| || || ||||| || || |||||||| Sbjct 28258020 TGACACCATTGAGAATGTCAAGGGGAAGATTCAAGAAAAAGAGGGCATCCCCCCAGACCA 28258079 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | || || ||||| || ||||| || || |||| || ||||| | ||||| || Sbjct 28258080 GCAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 28258139 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || ||| | || || | ||||| Sbjct 28258140 CATCCAGAAGGAGTCCACCCTGCACCTGGTCCTCCGCCTCAGAGGTGG 28258187 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || || ||||| || || || || || ||| | | Sbjct 28258417 ATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAAGTGGAGCCCAGC 28258476 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || || ||||||||||| || || || ||||||||| Sbjct 28258477 GACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAGGAAGGCATCCCCCCAGACCAG 28258536 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || ||||| | ||||| || Sbjct 28258537 CAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 28258596 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || ||| | || || | ||||| Sbjct 28258597 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTCCGCCTCAGAGGTGG 28258643 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || || ||||| || || || || || ||| | | Sbjct 28258873 ATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAAGTGGAGCCCAGC 28258932 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || || ||||||||||| || || || ||||||||| Sbjct 28258933 GACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAGGAAGGCATCCCCCCAGACCAG 28258992 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || ||||| | ||||| || Sbjct 28258993 CAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 28259052 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || ||| | || || | ||||| Sbjct 28259053 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTCCGCCTCAGAGGTGG 28259099 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | || || ||||| || || || || || ||| | | Sbjct 28259101 ATGCAGATCTTTGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAAGTGGAGCCCAGC 28259160 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || ||||||||||| || || || ||||||||| Sbjct 28259161 GACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAAGGCATCCCCCCAGACCAG 28259220 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || ||||| | ||||| || Sbjct 28259221 CAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 28259280 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || ||| | || || | ||||| Sbjct 28259281 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTCCGCCTCAGAGGTGG 28259327 Score = 129 bits (142), Expect = 7e-25 Identities = 151/203 (74%), Gaps = 1/203 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || || |||||||| || || ||||||| || | | Sbjct 39747587 ATGCAGATCTTTGTGAAGACCCTAACAGGCAAGACCATCACCTTTGAGGTCAAGCCCAGC 39747528 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 ||| || | ||| | || |||||||| |||||||||||||| || | || |||||| Sbjct 39747527 AATACCAA-GAGAATGTCAAAGCTAAAATCCAGGACAAGGAGGGCATCCTGCCTGACCAG 39747469 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| |||| ||||||| | || || || ||||||| | ||| || ||||||| || Sbjct 39747468 CAGTGTCTGATTTTTGTCAGCAAACAGCTGGAGGATGGCCATACACTCTCAGACTACGAT 39747409 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||| || || ||||| ||||| Sbjct 39747408 ATCCAGAAAGAGTCCACCCTTCA 39747386 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || || ||||| || || || || || ||| | | Sbjct 28258189 ATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAAGTGGAGCCCAGC 28258248 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || ||||||||||| || || || ||||||||| Sbjct 28258249 GACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAAGGCATCCCCCCAGACCAG 28258308 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || ||||| | ||||| || Sbjct 28258309 CAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 28258368 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || ||| | || || | ||||| Sbjct 28258369 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTCCGCCTCAGAGGTGG 28258415 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || || ||||| || || || || || ||| | | Sbjct 28258645 ATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAAGTGGAGCCCAGC 28258704 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || ||||||||||| || || || ||||||||| Sbjct 28258705 GACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAAGGCATCCCCCCAGACCAG 28258764 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || ||||| | ||||| || Sbjct 28258765 CAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 28258824 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || ||| | || || | ||||| Sbjct 28258825 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTCCGCCTCAGAGGTGG 28258871 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || || ||||| || || || || || ||| | | Sbjct 28259329 ATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAAGTGGAGCCCAGC 28259388 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || ||||||||||| || || || ||||||||| Sbjct 28259389 GACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAAGGCATCCCCCCAGACCAG 28259448 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || ||||| | ||||| || Sbjct 28259449 CAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 28259508 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || ||| | || || | ||||| Sbjct 28259509 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTCCGCCTCAGAGGTGG 28259555 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || || ||||| || || || || || ||| | | Sbjct 28259785 ATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAAGTGGAGCCCAGC 28259844 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || ||||||||||| || || || ||||||||| Sbjct 28259845 GACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAAGGCATCCCCCCAGACCAG 28259904 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || ||||| | ||||| || Sbjct 28259905 CAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 28259964 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || ||| | || || | ||||| Sbjct 28259965 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTCCGCCTCAGAGGTGG 28260011 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || || ||||| || || || || || ||| | | Sbjct 28260241 ATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAAGTGGAGCCCAGC 28260300 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || || || |||||||| || || || ||||||||| Sbjct 28260301 GACACCATCGAGAATGTCAAGGCGAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 28260360 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || ||||| | ||||| || Sbjct 28260361 CAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 28260420 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || ||| | || || | ||||| Sbjct 28260421 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTCCGCCTCAGAGGTGG 28260467 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || || ||||| || || || || || ||| | | Sbjct 28259557 ATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAAGTGGAGCCCAGC 28259616 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || || |||||||| || || || ||||||||| Sbjct 28259617 GACACCATCGAGAACGTCAAGGCGAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 28259676 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || ||||| | ||||| || Sbjct 28259677 CAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 28259736 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || ||| | || || | ||||| Sbjct 28259737 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTCCGCCTCAGAGGTGG 28259783 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || || ||||| || || || || || ||| | | Sbjct 28260013 ATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAAGTGGAGCCCAGC 28260072 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || || |||||||| || || || ||||||||| Sbjct 28260073 GACACCATCGAGAACGTCAAGGCGAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 28260132 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || ||||| | ||||| || Sbjct 28260133 CAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 28260192 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || ||| | || || | ||||| Sbjct 28260193 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTCCGCCTCAGAGGTGG 28260239 Score = 122 bits (134), Expect = 1e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || || ||||| || || || || || ||| | | Sbjct 28260469 ATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAAGTGGAGCCCAGC 28260528 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || || || |||||||| || || || ||||||||| Sbjct 28260529 GACACCATCGAGAATGTCAAGGCGAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 28260588 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || ||||| | ||||| || Sbjct 28260589 CAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 28260648 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCG 27620 |||| ||||| ||||| || || | ||| |||| Sbjct 28260649 ATCCAGAAGGAGTCCACCCTGCACTTGGTCCTGCG 28260683 >seq15 Length=140412725 Score = 95.1 bits (104), Expect = 1e-14 Identities = 116/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||| |||||| | ||| ||||||| || || || ||||| ||| | | Sbjct 63373994 AATGCAAATCTTCACCAAGACCTTAACCAGCAAGACCATCACCCTGGAGGTGGAGCCCAG 63374053 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | || || ||| ||||||| || || ||||| ||||| || | ||| | ||||| Sbjct 63374054 TGACACCA-TGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCA-TCCAGCTGACCA 63374111 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGA 27560 |||||| || || ||||| || || || || || || Sbjct 63374112 GCAGCGGCTCATCTTTGCAGGCAAACAGCTGGAAGA 63374147 >seq3 Length=132848913 Score = 86.0 bits (94), Expect = 7e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 64721 TCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCT 64780 ||| ||| |||||| |||||||| || |||||||||||||| || || || |||| Sbjct 126361102 TCGTAGCCTTTGCCGCCGTGGAAGGCATCTTCTTTTCTGGGTCTTTTGCATCCATATTCT 126361043 Query 64781 GGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGAT 64832 |||| || || || || |||||||| || ||| | ||||| ||||| || || Sbjct 126361042 GGCTCAAGAAACGAGGACTGATGCCTGGCCTGACCTTTTCCAACGAACTTAT 126360991 >seq8 Length=138966237 Score = 82.4 bits (90), Expect = 9e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 27407 TGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTG 27466 |||| |||| || ||||| | || || |||| | || || ||||| ||| | ||| Sbjct 4088583 TGCAGGTCTTGGTGAAGACCCCGACAGGTGAGACCCTCACCCTGGAGGTGGAGCCTAGTG 4088642 Query 27467 ATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGC 27526 || || || ||| | |||||||| |||| |||||||| || || || ||||||| Sbjct 4088643 ATGCCACTGAGAATGCCAGAGCTAAAATCCAGGCTAAGGAGGGCATCCCGCCTGACCAGC 4088702 Query 27527 AGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATG 27586 ||||||| | ||||| || || || || ||||||| | || || ||| | | | | Sbjct 4088703 AGCGTCTGA-ATTTGCCGGCAAACAGCTGGAGGATG-GCTGACGCTCTCAGGCCACACCG 4088760 Query 27587 TCCAAAAGGAATCCACTCT 27605 |||| || || ||||| || Sbjct 4088761 TCCAGAAAGAGTCCACCCT 4088779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570306029996560