Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1971 190 2e-43 seq2230 138 1e-27 >seq1971 Length=167910 Score = 190 bits (210), Expect = 2e-43 Identities = 410/607 (68%), Gaps = 6/607 (1%) Strand=Plus/Minus Query 16918 AACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCA 16977 ||||| | ||| || ||| | ||| || ||||| |||||||| || || || || || Sbjct 91577 AACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGAACATCAGGCAGGCAAAGTCACA 91518 Query 16978 ATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCC 17037 ||||| |||||||||||||| |||||||| || |||||||| | |||| |||| ||| Sbjct 91517 GTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGCCATCAGTCC 91458 Query 17038 TCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGA 17097 ||||||||| | ||| ||||| | || || || ||||||||||| || || || | | Sbjct 91457 TCGTTTCTTGAGCCACAATATAGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCGCTGC 91398 Query 17098 TGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGT-TACGAATCCATTTCTGCA 17156 |||| || | | |||| ||||||| || ||||||| | || |||| | Sbjct 91397 GACAAAGGCTACGACAGGTTCTCCGTACGTAGCCTCTTTGTCTTCG-ATCCGGCGCAAGG 91339 Query 17157 CCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA--ATTTCTC 17214 |||| || || | ||||| ||| || || || |||| || || | | ||| | Sbjct 91338 CCCAATCTGCCGCCTTCTTTACACAAGGCACTGTCTCACTGGCATTGAAGAGGAATTCCC 91279 Query 17215 TTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTAT 17274 ||| | || | || | || || || || ||||| || |||| |||||| | ||||| Sbjct 91278 TTTCT-TTGGA-ATCTTTAATGTAAGTGTCAATGAGGAGACTGTCCATTTCACAATGTAT 91221 Query 17275 GTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCAC 17334 ||| |||| ||| || || || || || || | |||||||||| || |||||||| Sbjct 91220 GTTTTCCACGGCAATTTGGAAGCCATAGAAATAACGGGCTTCCGTAATCTGAACTTCTTG 91161 Query 17335 GTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAA 17394 | | || ||| | ||||| || || |||| || || || || | || |||| Sbjct 91160 GCTAAGCCGCTCCACCCAGTTTTCATTTACTATGCTATCACTTGCTGCAGAGAAAGCCAG 91101 Query 17395 TATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTT 17454 | | | | ||||| || | || || || | || | ||||| || | || || Sbjct 91100 AACACACGAAGTGAAACATCTCTCCTCAGGCTTCAGGGCTTCCCAGTGCTGAATGTCCTT 91041 Query 17455 GGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCA 17514 ||| | ||||| || || | ||||| || || | | || || |||||||| | ||| Sbjct 91040 GGAAAGGTCCACCTCCTCAGCTGTCCAGAAGGAAGACTCCGCTTTCTTATACATCTGCCA 90981 Query 17515 AATATCA 17521 || |||| Sbjct 90980 AACATCA 90974 Score = 105 bits (116), Expect = 7e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 ||||||||||||| |||||||| || |||||||| | ||||||||| ||||||||| | Sbjct 88602 CCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTT 88543 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 | | ||| ||||||| || || || ||||||||||| || || || || | ||||| | Sbjct 88542 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGG 88483 Query 17106 C 17106 | Sbjct 88482 C 88482 >seq2230 Length=225668 Score = 138 bits (152), Expect = 1e-27 Identities = 154/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 16936 TGTATGTTTA--AGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCT 16993 ||| ||| || || ||||| |||||||| || || || || || ||||| ||||||||| Sbjct 225119 TGTTTGTGTAGCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCT 225060 Query 16994 CTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAA 17053 ||||| ||||| || || |||||||| | |||| |||| |||||||||||| | ||| Sbjct 225059 CTGCTAATAAGATCATTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCAC 225000 Query 17054 AATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAAT 17113 ||||| | || || |||||||||||||| || || || | | |||| || | | Sbjct 224999 AATATAGATGCAAAAGACCCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGCTACGACA 224940 Query 17114 CGTTCGGCGTACGTCGCGTCTTTGT 17138 |||| ||||||| || ||||||| Sbjct 224939 GGTTCTCCGTACGTAGCCTCTTTGT 224915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515989359788760