Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1971 181 1e-40 seq2230 125 7e-24 seq4569 114 1e-20 >seq1971 Length=167910 Score = 181 bits (200), Expect = 1e-40 Identities = 404/602 (67%), Gaps = 6/602 (1%) Strand=Plus/Minus Query 16184 AGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGT 16243 |||||||| ||||| || || || ||||| || |||| || ||||||||||| |||||| Sbjct 91549 AGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGT 91490 Query 16244 TCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA 16303 || |||||||| || | || | ||| |||||||||||| | ||| ||||| | ||| Sbjct 91489 TCATTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATATAGATGCA 91430 Query 16304 AATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTAC 16363 || || || |||||||| || || || | | |||| || | | |||| ||||| Sbjct 91429 AAAGAACCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGCTACGACAGGTTCTCCGTAC 91370 Query 16364 GTAGCATCTTTAT-TACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATC 16422 ||||| ||||| | | || |||| | |||| || || | |||| |||| Sbjct 91369 GTAGCCTCTTTGTCTTCG-ATCCGGCGCAAGGCCCAATCTGCCGCCTTCTTTACACAAGG 91311 Query 16423 CATCGTTTCTATGGCCTTAAACA--ATTTCTCTTTTTCCTGAATATCGATTATATACGTA 16480 || || || |||| || || | | ||| |||| | || ||| | || || || Sbjct 91310 CACTGTCTCACTGGCATTGAAGAGGAATTCCCTTTCTTTGGA--ATCTTTAATGTAAGTG 91253 Query 16481 TCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAG 16540 ||||| || | ||||| |||||| | |||||||| || | ||| || || || |||||| Sbjct 91252 TCAATGAGGAGACTGTCCATTTCACAATGTATGTTTTCCACGGCAATTTGGAAGCCATAG 91193 Query 16541 AAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTC 16600 || | || || |||| || || ||||| | || || ||| || ||| ||||| Sbjct 91192 AAATAACGGGCTTCCGTAATCTGAACTTCTTGGCTAAGCCGCTCCACCCAGTTTTCATTT 91133 Query 16601 ACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCA 16660 || || | |||||||| ||| | || |||| | | | ||||| || | || ||| Sbjct 91132 ACTATGCTATCACTTGCTGCAGAGAAAGCCAGAACACACGAAGTGAAACATCTCTCCTCA 91073 Query 16661 GATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAA 16720 | | || | ||| | | | || ||||| | ||||| || || | ||||| Sbjct 91072 GGCTTCAGGGCTTCCCAGTGCTGAATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAG 91013 Query 16721 AAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACG 16780 ||| || | | || || |||||||| | ||||| |||| |||| | ||||| | | Sbjct 91012 AAGGAAGACTCCGCTTTCTTATACATCTGCCAAACATCACGATATTCGACAGGAAAGATG 90953 Query 16781 AC 16782 || Sbjct 90952 AC 90951 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285 ||||||||||| |||||||| |||||||| || | || ||||| ||||||||| || Sbjct 88600 TCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTTTG 88541 Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344 | ||||||||||| ||||| || || |||||||| || || || || | ||||| || Sbjct 88540 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGGC 88482 >seq2230 Length=225668 Score = 125 bits (138), Expect = 7e-24 Identities = 294/439 (67%), Gaps = 5/439 (1%) Strand=Plus/Minus Query 15938 AAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCCATAAAATCAAAGGGATTAG-TAG- 15995 ||||||||||| || || || || |||| |||||||| ||||| ||||| || Sbjct 225352 AAGAAGTTAGTCTTCCCTTCCGT-GAAATATCCTCCATAAAGTCAAATGGATTTTCTACT 225294 Query 15996 CTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTAATCTATCTGCTACAAATTCTATAT 16055 ||||||| ||| | |||| ||| | | ||| ||||| || ||||| | | Sbjct 225293 CTGAAAAC--CTTGCTAAAACCCACCTCCAGCATAAGTCTGTCTGCCACGAATTCGACGT 225236 Query 16056 ATTGACACATTAAGTCGCAATTAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAA 16115 | || ||| || ||||||| || || || || || | || |||| ||| | | Sbjct 225235 ACTGCTTCATCAAAGCGCAATTCATCCCGATGAGCTCCACTGTCAGGGCTTCTGTGAGGA 225176 Query 16116 ATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGGTGGCTCGTGTTTCAGACGGTG 16175 | | ||||||||| | | || || || || || ||| || || || Sbjct 225175 ACTCGTGTTCTATCCTAGCTGCACTGACGATTATTTCTTTGACTCTCTGCTCCGAATGTT 225116 Query 16176 TATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGC 16235 | || |||||||| ||||| || || || ||||| || |||| || |||||||||| Sbjct 225115 TGTGTAGCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGC 225056 Query 16236 TGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATA 16295 | ||||| || |||||||| || | || | ||| |||||||||||| | ||| |||| Sbjct 225055 TAATAAGATCATTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATA 224996 Query 16296 TCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTT 16355 | | ||||| ||||| |||||||| || || || | | |||| || | | ||| Sbjct 224995 TAGATGCAAAAGACCCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGCTACGACAGGTT 224936 Query 16356 CCGCGTACGTAGCATCTTT 16374 | |||||||||| ||||| Sbjct 224935 CTCCGTACGTAGCCTCTTT 224917 >seq4569 Length=138791 Score = 114 bits (126), Expect = 1e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283 |||| ||||||||||| ||||| ||||||||||| | || ||||| ||||| ||||| Sbjct 31093 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGTCCTCTTTTCT 31034 Query 16284 TTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAG 16343 ||| ||||||||| |||||||| || ||||| ||||| || || || |||| ||||| | Sbjct 31033 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 30974 Query 16344 C 16344 | Sbjct 30973 C 30973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 509876596077240