Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq4304 123 2e-23 >seq4304 Length=228172 Score = 123 bits (136), Expect = 2e-23 Identities = 363/546 (66%), Gaps = 15/546 (3%) Strand=Plus/Plus Query 18805 TTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAATCAAACTATT 18864 |||| |||| |||||||| | ||| | || ||||| ||||| ||| || || | | Sbjct 2508 TTTATAGCTTTCAGTGGAGGCTTTTGGTGGCCGAATACAAAGA-TGTGGATTTAAATTTA 2566 Query 18865 TACAG--CAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATTAAAACAAACCCAGA 18922 | ||| |||||| | || || ||||||| || || || ||||| ||||| |||| || Sbjct 2567 TTCAGGTCAAGGAGTAGACCAACTGCAAAAGGTGATTGACACAATCAAAACCAACCTTGA 2626 Query 18923 AAGCCGACGAATGATTATATCGT-CTTGGAATCCAAAGGATATCCCCTTA-ATGGTACTA 18980 | | || |||| ||| || ||| ||||||||| |||| ||| || | | || | Sbjct 2627 AGACAGAAGAATCATTCTA-CGTGCTTGGAATCGAAAGATCTTCCTCTCATACCCCACCA 2685 Query 18981 CCT---CCATGTCACACGT--TATGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCC 19035 || || ||| || | | || || || ||||| ||| ||| | |||||| Sbjct 2686 CCCTGCCCCTGTGCCATGCCCTTTGCCACTTCTACGTGATGAACCATGACTG-TCCTGC- 2743 Query 19036 AAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATG 19095 | | ||||||| || || || | |||||| | || | |||||||| || | |||| Sbjct 2744 AGCTGTACCAGAAGTCAGGAGACAGGGGCCTGAGTGTGTCCTTCAACATCGCCAGCTATG 2803 Query 19096 CACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAATTCATA 19155 | || || |||||||| | || || | ||||| || || | || || | | || | Sbjct 2804 CCCTGCTCACCTACATGATCGCACACATCACAGGCCTGAAGCCAGGTGACTCTGTACACA 2863 Query 19156 CAATGGGGGATGCACATATTTACTTGAATCATATAGATGCT-TTAAAAGTGCAGCTAGCT 19214 | |||| ||||||||||||||| | |||| || || ||| | ||| ||||||| Sbjct 2864 CTTTGGGAGATGCACATATTTACCTTGATCACATTGA-GCTGCTGAAAATGCAGCTTCAG 2922 Query 19215 CGATCCCCAAAACCTTTTCCTTGCCTTAAAATTATTCGAAATGTAACAGATATAAACGAC 19274 || ||| ||||| || || ||||| || |||| || | || | ||| Sbjct 2923 GGAGAATCAAGGCCTTTCCCAAAGCTCAAAATCCTTGGAAAAGTTGAGAAAATCGATGAC 2982 Query 19275 TTTAAATGGGACGATTTTCAGCTTGATGGATATAATCCACAccccccccTAAAAATGGAA 19334 || || || | |||||| |||| || || | ||| || ||| | | ||||||||| Sbjct 2983 TTCAAGGCTGAAAACTTTCAGATTGAAGGCTACAGTCCCCATCCCACTATTAAAATGGAA 3042 Query 19335 ATGGCT 19340 |||||| Sbjct 3043 ATGGCT 3048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398332738792065