Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq3296 464 4e-126
seq6538 425 4e-114
seq3042 389 3e-103
seq8880 172 4e-38
seq455 120 2e-22
seq4304 91.5 1e-13
>seq3296
Length=145999
Score = 464 bits (514), Expect = 4e-126
Identities = 443/565 (78%), Gaps = 5/565 (1%)
Strand=Plus/Minus
Query 3968 ATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACAT 4027
|||||| ||||| ||||||||||||||||||| |||||| | |||||| || || ||||
Sbjct 31587 ATTAATTGTTCTTTTCATATACTTCAAATTTGTGCTTAATGCCTTTCTCCTCCTGGACAT 31528
Query 4028 TAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAA 4087
|||| |||| | |||||||||| | | ||||||||| || | ||||| ||||||||
Sbjct 31527 CAGAAGGAACCCCTGGATATTCTGGGAGGAATTTGTATTTTTCCAAATCAATTTCTGGAA 31468
Query 4088 AAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCATG 4147
||| ||||||| |||||| || ||||||||||| |||||||| || |||||| || ||
Sbjct 31467 AAATTGTGTCACCTTCAAATTCCTGCATGATCCTTGTCACAAATAGACTAAGATGGCCTG 31408
Query 4148 GATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTT 4207
| | ||| | ||||| || || |||||||| ||||| | |||||| |||||||| ||||
Sbjct 31407 GCTTGCTCCTGGCTTCCTTGTAAACAGAACTGCCTCCCACTATCCAAACCATGTCCACTT 31348
Query 4208 TATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAA 4267
|||||| ||||||||| || ||||| |||||||| |||||||| | ||| || || | ||
Sbjct 31347 TATTTGTTAATTCTGGTTGCTCGGTGAGTTTTAAGGCATCATCCAGACTTTTGGCAAGAA 31288
Query 4268 AATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTT 4327
|||| ||| |||||| | ||||| ||||| |||||||||| | |||||||||| |
Sbjct 31287 AATGCACTCCCTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTATATTAATTCTGTTCT 31228
Query 4328 TTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAAAT 4387
||||||| || |||||||| |||| |||||||| ||||| ||||||||||||| ||||
Sbjct 31227 TTAAAGGTCGATTCTTCTCTGGAAAGGAGAACCAGGTCTTCCTACCCATAATCACCAAAT 31168
Query 4388 TCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTTTAAAATCATTCA 4447
|||||||| || ||| ||||| || || |||||||||||||||| | | ||||||
Sbjct 31167 TCTGTTTACCTTCTACTGAAGAGGTTGTGGTCATTCTTTGGAAATACCTGTATTCATTCC 31108
Query 4448 TAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTGAGCTACAGCAA 4507
| || | || | || || || | ||||| ||||||||||| || | ||||| |
Sbjct 31107 TGAG-CGGGG----GCCAGGTCCCCATTCTTGCCGATGCCCATGTTCTGGGACACAGCGA 31053
Query 4508 CAATGCAGTTTAGTGCTTGAACCAT 4532
||||||||||| | |||||||
Sbjct 31052 TGATGCAGTTTAGCGAACGAACCAT 31028
>seq6538
Length=202454
Score = 425 bits (470), Expect = 4e-114
Identities = 449/591 (76%), Gaps = 9/591 (2%)
Strand=Plus/Minus
Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014
|||| || || ||| || ||||| |||||||||||||||||||||||||| | ||||
Sbjct 68271 AAAACACTTTCACATTTATCGTTCTTTTCATATACTTCAAATTTGTACTTAATGCCTTTC 68212
Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074
|| || || || | ||||||||||| |||||||||| | |||||| ||||| || | |
Sbjct 68211 TCCTCCTGGACGTCAGAAAGAACACCTGGATATTCTGGGATAAGTTTATATTTTTCCAAA 68152
Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134
|||| || ||||||||| ||||||| |||||| || ||||||||||| ||||| || |||
Sbjct 68151 TCAATTTTTGGAAAAAATGTGTCACTTTCAAATTCCTGCATGATCCTTGTCACGAATAGT 68092
Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194
|||| | || ||| | || | ||||| ||||| |||||||| || | | ||| ||
Sbjct 68091 CTAAGGTGGCCTGGCTTGTTCGTGGCTTCCTTATAAACAGAACTGCCCGCCACTATGCAA 68032
Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254
|||||||| |||||||||| ||||||||| | || ||||||||||| || ||||| | |
Sbjct 68031 ACCATGTCCACTTTATTTGTTAATTCTGGTCGCTCAGTAAGTTTTAAGGCGTCATCCAGA 67972
Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314
|| || || | ||||||||||| |||||| | ||||| ||||| | ||||||| |
Sbjct 67971 CTTTTGGCAAGAAAATGAGCTCCCTGTGGAGGTTCCTTGAGTTCTCTAATGAGAACTATG 67912
Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTC----AGGAATTGAGAACCAAGTCTTTTT 4370
||||||||| | ||||||| || |||||||| | |||| | |||||| || || |
Sbjct 67911 TTAATTCTGTCCCTTAAAGGTCGATTCTTCTCTGGAATGAATGGCGAACCAGGTTTTCCT 67852
Query 4371 ACCCATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAA 4430
|||||||||||| |||||||||||| || ||| ||||| || || |||||||| |||||
Sbjct 67851 ACCCATAATCACCAAATTCTGTTTACCTTCTACTGAAGAGGTTGTGGTCATTCTCTGGAA 67792
Query 4431 ATGTTTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCAT 4490
|| | | |||||| | || ||||| |||| || || | |||| ||||||||
Sbjct 67791 ATACCTGTATTCATTCCTGAGCGAGGGCCAGGGCAGGTCCCCGTTCTTGCTGATGCCCAT 67732
Query 4491 GTTTTGAGC-----TACAGCAACAATGCAGTTTAGTGCTTGAACCATAATA 4536
||| || | |||| | ||||||||||||| ||||||| |||
Sbjct 67731 GTTCTGCCCATGTACACAGTGATGATGCAGTTTAGTGGACGAACCATGATA 67681
>seq3042
Length=197541
Score = 389 bits (430), Expect = 3e-103
Identities = 372/478 (78%), Gaps = 9/478 (2%)
Strand=Plus/Plus
Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014
|||| || || |||||| ||||| ||||| |||||||| || | ||||
Sbjct 153439 AAAACACTTTCATATTAACTGTTCTTTCCATATTCTTCAAATATG---------CCTTTC 153489
Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074
|| || || |||| |||| |||||| |||||||||| | |||||| ||||| || | |
Sbjct 153490 TCCTCCTGGACATCAGAAGGAACACCTGGATATTCTGGGAGAAGTTTATATTTTTCCAAA 153549
Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134
||| |||||||||||| ||||||| |||||| || ||||||||||| |||||||| |||
Sbjct 153550 TCAGTTTCTGGAAAAAATGTGTCACTTTCAAATTCCTGCATGATCCTTGTCACAAATAGT 153609
Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194
|||| || ||| |||| ||||| || || || ||||| ||| | ||||||
Sbjct 153610 CGCAGATGGCCTGGCCTGTTCATGGCTTCCTTGTAAACTGAACTGTGTCCCACTATCCAA 153669
Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254
|||||||| |||||||||| ||||||||| || || |||||||||| |||||||| | |
Sbjct 153670 ACCATGTCCACTTTATTTGTTAATTCTGGTTGCTCAATAAGTTTTAAGGCATCATCCAGA 153729
Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314
|| || || | ||||||||||| |||||| | ||||| ||||| | |||||||| | |
Sbjct 153730 CTTTTGGCAAGAAAATGAGCTCCCTGTGGAGGTTCCTTGAGTTCTCTACTGAGAACTATA 153789
Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374
||||||||| | | |||||| || ||| |||| ||||| |||||||| ||||| |||||
Sbjct 153790 TTAATTCTGTCCTCTAAAGGTCGATTCGTCTCTGGAATGGAGAACCAGGTCTTCCTACCC 153849
Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAAT 4432
|||||||| |||||||||||| || ||| ||||| || || ||||||||||||||||
Sbjct 153850 ATAATCACCAAATTCTGTTTACCTTCTACTGAAGAAGTTGTGGTCATTCTTTGGAAAT 153907
>seq8880
Length=72913
Score = 172 bits (190), Expect = 4e-38
Identities = 173/225 (77%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 26948 GTGAACAATGGGAGTAACGCATGTGCAGCCTACAGTCACTAGCATCTTCTCTAGCCTAAA 27007
||| |||||||| || || || |||||||| || | ||| ||||||||||| |||| ||
Sbjct 7742 GTGGACAATGGGGGTGACACAGGTGCAGCCCACGGCCACCAGCATCTTCTCCAGCCGGAA 7801
Query 27008 TGAATTAGGGCAGGGTTGATGCCCTTTGCGCACCACTAGAATCTCTTGTTGGATAGGGAC 27067
|| | |||||| | ||| || | | |||| || || |||||||| ||||| |||||
Sbjct 7802 GGAGTGGGGGCAGTGCTGAGGCTCCCTTCGCAGGACCAGGATCTCTTGCTGGATGGGGAC 7861
Query 27068 TGAGTTCATGTGGTAGTCTACATTCCCATCAGCATTAACACATCCTAAGTAGCGACACTT 27127
||||||||||| | ||| || ||||| |||||||| ||||| || |||| || |||||
Sbjct 7862 GGAGTTCATGTGATGGTCCACCTTCCCTTCAGCATTGACACAGCCCAAGTGGCTGCACTT 7921
Query 27128 TGCTTCCCAAATCACAGAGGGATATCTATCTTGATCTTCATTGCG 27172
|| ||||| ||||||||||| || || || || ||||||||
Sbjct 7922 GGCCTCCCAGATCACAGAGGGGTACCTCTCAGAGTCCTCATTGCG 7966
>seq455
Length=298234
Score = 120 bits (132), Expect = 2e-22
Identities = 102/126 (81%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 4165 TTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGC 4224
||||| ||||||| ||||| | ||||||||||||||| ||| |||||| |||||||||
Sbjct 71114 TTATAAACAGAACCGCCTCCCACTATCCAGACCATGTCCACTGTATTTGTTAATTCTGGT 71173
Query 4225 TGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGA 4284
|| || |||||||||| ||| |||| | ||| || || | ||||||||||| ||||||
Sbjct 71174 TGCTCAATAAGTTTTAAGGCACCATCCAGACTTTTGGCAAGAAAATGAGCTCCCTGTGGA 71233
Query 4285 AGCTCC 4290
| |||
Sbjct 71234 GGTTCC 71239
Score = 113 bits (124), Expect = 3e-20
Identities = 91/110 (83%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349
||| ||||| | |||||||| | |||||||||| | ||||| || || |||||||| ||
Sbjct 77978 CTTGAGTTCTCTACTGAGAACTATATTAATTCTGTCCTTTAATGGTCGATTCTTCTCTGG 78037
Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399
||| |||||||| || || ||||||||||||| |||||||||||| |||
Sbjct 78038 AATGGAGAACCAGGTTTTCCTACCCATAATCACCAAATTCTGTTTACCTG 78087
Score = 111 bits (122), Expect = 1e-19
Identities = 91/111 (82%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 4056 AAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCAT 4115
|||||| ||||| || | ||||| |||||||||||| ||||||| |||||| || |||||
Sbjct 66819 AAGTTTATATTTTTCCAAATCAATTTCTGGAAAAAATGTGTCACTTTCAAATTCCTGCAT 66878
Query 4116 GATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACTCATAGCTTCTTT 4166
|||||| |||||||| ||| |||||| || ||| | |||| ||||| ||
Sbjct 66879 GATCCTTGTCACAAATAGTCTAAGATGGCCTGGCTTGTTCATGGCTTCCTT 66929
Score = 96.9 bits (106), Expect = 2e-15
Identities = 77/93 (83%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014
|||| || || |||||| ||||| |||||||||||||||||||||||||| | ||||
Sbjct 58788 AAAACACTTTCACATTAATTGTTCTTTTCATATACTTCAAATTTGTACTTAATGCCTTTC 58847
Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATAT 4047
|| || || |||| |||| |||||| |||||||
Sbjct 58848 TCCTCCTGGACATCAGAAGGAACACCTGGATAT 58880
>seq4304
Length=228172
Score = 91.5 bits (100), Expect = 1e-13
Identities = 373/575 (65%), Gaps = 21/575 (4%)
Strand=Plus/Minus
Query 101539 AGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATAT-AATGTCATCTG 101597
|||||| | ||||||||| | || || || | ||| ||| ||| | || || || |
Sbjct 3048 AGCCATTTCCATTTTAATAGTGGGATGGGGACTGTAGCCTTC-AATCTGAAAGTTTTCAG 2990
Query 101598 CTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGGTCTAG 101657
| || |||||||| || ||| |||| | | | | || |||| || || || |
Sbjct 2989 CCTTGAAGTCATCGATTTTCTCAACTTTTCCAAGGATTTTGAGCTTTGGGAAAGGCCTTG 2930
Query 101658 GAGTTCGCGTCAACTGCATTTTAAG-AGCATCAATGTGATCTACATAGATGTGAGCATCT 101716
|| | | ||||||||| || ||| ||||||||||| | || || || ||||||
Sbjct 2929 ATTCTCCCTGAAGCTGCATTTTCAGCAGC-TCAATGTGATCAAGGTAAATATGTGCATCT 2871
Query 101717 CCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTT 101776
|| | ||| || | | | || || ||| || |||| || || |||||| | ||
Sbjct 2870 CCCAAAGTGTGTACAGAGTCACCTGGCTTCAGGCCTGTGATGTGTGCGATCATGTAGGTG 2811
Query 101777 AAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGA 101836
| || | |||||| || ||||| || | ||| | | ||| | || |||| | ||
Sbjct 2810 AGCAGGGCATAGCTGGCGATGTTGAAGGACACACTCAGGCCCCTGTCTCCTGACTTCTGG 2751
Query 101837 TACAGTTGACAGGAAAG-CTT--TCCATCACAGACATAAAATTGACTTAATACATGACAA 101893
||||| || ||||| || | | | |||||| || || || | | |||| ||
Sbjct 2750 TACAGCTG-CAGGACAGTCATGGTTCATCACG----TAGAAGTGGCAAAGGGCATGGCAC 2696
Query 101894 GGCGGCAACACCAT----TTT---AGGAATGTCTGAAACATTCCAAGCACACATTAACAT 101946
| |||| | | | ||||| ||| ||||||||||| | | ||
Sbjct 2695 AGGGGCAGGGTGGTGGGGTATGAGAGGAAGATCTTTCG-ATTCCAAGCACGTAGAATGAT 2637
Query 101947 CCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCC 102006
||||| ||| | |||| ||||| || || ||||||| || || | |||||| |||||
Sbjct 2636 TCTTCTGTCTTCAAGGTTGGTTTTGATTGTGTCAATCACCTTTTGCAGTTGGTCTACTCC 2577
Query 102007 TTCTCCTTTAT-AATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAA 102065
|| ||| || ||| | ||| |||| ||||| || | ||| ||||||||||||
Sbjct 2576 TTGACCTGAATAAATTTAAATCCACATCTTTGTATTCGGCCACCAAAAGCCTCCACTGAA 2517
Query 102066 ATCCATACACAGGTCCAAGATCTCCTTCATCTCTG 102100
| | ||| || | || | || ||||| ||||||
Sbjct 2516 AGCTATAAACTAGGCCTAAATTCCCTTCTTCTCTG 2482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 360192087908807
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |