Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq3296 464 4e-126 seq6538 425 4e-114 seq3042 389 3e-103 seq8880 172 4e-38 seq455 120 2e-22 seq4304 91.5 1e-13 >seq3296 Length=145999 Score = 464 bits (514), Expect = 4e-126 Identities = 443/565 (78%), Gaps = 5/565 (1%) Strand=Plus/Minus Query 3968 ATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACAT 4027 |||||| ||||| ||||||||||||||||||| |||||| | |||||| || || |||| Sbjct 31587 ATTAATTGTTCTTTTCATATACTTCAAATTTGTGCTTAATGCCTTTCTCCTCCTGGACAT 31528 Query 4028 TAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAA 4087 |||| |||| | |||||||||| | | ||||||||| || | ||||| |||||||| Sbjct 31527 CAGAAGGAACCCCTGGATATTCTGGGAGGAATTTGTATTTTTCCAAATCAATTTCTGGAA 31468 Query 4088 AAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCATG 4147 ||| ||||||| |||||| || ||||||||||| |||||||| || |||||| || || Sbjct 31467 AAATTGTGTCACCTTCAAATTCCTGCATGATCCTTGTCACAAATAGACTAAGATGGCCTG 31408 Query 4148 GATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTT 4207 | | ||| | ||||| || || |||||||| ||||| | |||||| |||||||| |||| Sbjct 31407 GCTTGCTCCTGGCTTCCTTGTAAACAGAACTGCCTCCCACTATCCAAACCATGTCCACTT 31348 Query 4208 TATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAA 4267 |||||| ||||||||| || ||||| |||||||| |||||||| | ||| || || | || Sbjct 31347 TATTTGTTAATTCTGGTTGCTCGGTGAGTTTTAAGGCATCATCCAGACTTTTGGCAAGAA 31288 Query 4268 AATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTT 4327 |||| ||| |||||| | ||||| ||||| |||||||||| | |||||||||| | Sbjct 31287 AATGCACTCCCTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTATATTAATTCTGTTCT 31228 Query 4328 TTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAAAT 4387 ||||||| || |||||||| |||| |||||||| ||||| ||||||||||||| |||| Sbjct 31227 TTAAAGGTCGATTCTTCTCTGGAAAGGAGAACCAGGTCTTCCTACCCATAATCACCAAAT 31168 Query 4388 TCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTTTAAAATCATTCA 4447 |||||||| || ||| ||||| || || |||||||||||||||| | | |||||| Sbjct 31167 TCTGTTTACCTTCTACTGAAGAGGTTGTGGTCATTCTTTGGAAATACCTGTATTCATTCC 31108 Query 4448 TAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTGAGCTACAGCAA 4507 | || | || | || || || | ||||| ||||||||||| || | ||||| | Sbjct 31107 TGAG-CGGGG----GCCAGGTCCCCATTCTTGCCGATGCCCATGTTCTGGGACACAGCGA 31053 Query 4508 CAATGCAGTTTAGTGCTTGAACCAT 4532 ||||||||||| | ||||||| Sbjct 31052 TGATGCAGTTTAGCGAACGAACCAT 31028 >seq6538 Length=202454 Score = 425 bits (470), Expect = 4e-114 Identities = 449/591 (76%), Gaps = 9/591 (2%) Strand=Plus/Minus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || ||| || ||||| |||||||||||||||||||||||||| | |||| Sbjct 68271 AAAACACTTTCACATTTATCGTTCTTTTCATATACTTCAAATTTGTACTTAATGCCTTTC 68212 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || || | ||||||||||| |||||||||| | |||||| ||||| || | | Sbjct 68211 TCCTCCTGGACGTCAGAAAGAACACCTGGATATTCTGGGATAAGTTTATATTTTTCCAAA 68152 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| || ||||||||| ||||||| |||||| || ||||||||||| ||||| || ||| Sbjct 68151 TCAATTTTTGGAAAAAATGTGTCACTTTCAAATTCCTGCATGATCCTTGTCACGAATAGT 68092 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 |||| | || ||| | || | ||||| ||||| |||||||| || | | ||| || Sbjct 68091 CTAAGGTGGCCTGGCTTGTTCGTGGCTTCCTTATAAACAGAACTGCCCGCCACTATGCAA 68032 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 |||||||| |||||||||| ||||||||| | || ||||||||||| || ||||| | | Sbjct 68031 ACCATGTCCACTTTATTTGTTAATTCTGGTCGCTCAGTAAGTTTTAAGGCGTCATCCAGA 67972 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314 || || || | ||||||||||| |||||| | ||||| ||||| | ||||||| | Sbjct 67971 CTTTTGGCAAGAAAATGAGCTCCCTGTGGAGGTTCCTTGAGTTCTCTAATGAGAACTATG 67912 Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTC----AGGAATTGAGAACCAAGTCTTTTT 4370 ||||||||| | ||||||| || |||||||| | |||| | |||||| || || | Sbjct 67911 TTAATTCTGTCCCTTAAAGGTCGATTCTTCTCTGGAATGAATGGCGAACCAGGTTTTCCT 67852 Query 4371 ACCCATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAA 4430 |||||||||||| |||||||||||| || ||| ||||| || || |||||||| ||||| Sbjct 67851 ACCCATAATCACCAAATTCTGTTTACCTTCTACTGAAGAGGTTGTGGTCATTCTCTGGAA 67792 Query 4431 ATGTTTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCAT 4490 || | | |||||| | || ||||| |||| || || | |||| |||||||| Sbjct 67791 ATACCTGTATTCATTCCTGAGCGAGGGCCAGGGCAGGTCCCCGTTCTTGCTGATGCCCAT 67732 Query 4491 GTTTTGAGC-----TACAGCAACAATGCAGTTTAGTGCTTGAACCATAATA 4536 ||| || | |||| | ||||||||||||| ||||||| ||| Sbjct 67731 GTTCTGCCCATGTACACAGTGATGATGCAGTTTAGTGGACGAACCATGATA 67681 >seq3042 Length=197541 Score = 389 bits (430), Expect = 3e-103 Identities = 372/478 (78%), Gaps = 9/478 (2%) Strand=Plus/Plus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || |||||| ||||| ||||| |||||||| || | |||| Sbjct 153439 AAAACACTTTCATATTAACTGTTCTTTCCATATTCTTCAAATATG---------CCTTTC 153489 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || |||| |||| |||||| |||||||||| | |||||| ||||| || | | Sbjct 153490 TCCTCCTGGACATCAGAAGGAACACCTGGATATTCTGGGAGAAGTTTATATTTTTCCAAA 153549 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 ||| |||||||||||| ||||||| |||||| || ||||||||||| |||||||| ||| Sbjct 153550 TCAGTTTCTGGAAAAAATGTGTCACTTTCAAATTCCTGCATGATCCTTGTCACAAATAGT 153609 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 |||| || ||| |||| ||||| || || || ||||| ||| | |||||| Sbjct 153610 CGCAGATGGCCTGGCCTGTTCATGGCTTCCTTGTAAACTGAACTGTGTCCCACTATCCAA 153669 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 |||||||| |||||||||| ||||||||| || || |||||||||| |||||||| | | Sbjct 153670 ACCATGTCCACTTTATTTGTTAATTCTGGTTGCTCAATAAGTTTTAAGGCATCATCCAGA 153729 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314 || || || | ||||||||||| |||||| | ||||| ||||| | |||||||| | | Sbjct 153730 CTTTTGGCAAGAAAATGAGCTCCCTGTGGAGGTTCCTTGAGTTCTCTACTGAGAACTATA 153789 Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374 ||||||||| | | |||||| || ||| |||| ||||| |||||||| ||||| ||||| Sbjct 153790 TTAATTCTGTCCTCTAAAGGTCGATTCGTCTCTGGAATGGAGAACCAGGTCTTCCTACCC 153849 Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAAT 4432 |||||||| |||||||||||| || ||| ||||| || || |||||||||||||||| Sbjct 153850 ATAATCACCAAATTCTGTTTACCTTCTACTGAAGAAGTTGTGGTCATTCTTTGGAAAT 153907 >seq8880 Length=72913 Score = 172 bits (190), Expect = 4e-38 Identities = 173/225 (77%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 26948 GTGAACAATGGGAGTAACGCATGTGCAGCCTACAGTCACTAGCATCTTCTCTAGCCTAAA 27007 ||| |||||||| || || || |||||||| || | ||| ||||||||||| |||| || Sbjct 7742 GTGGACAATGGGGGTGACACAGGTGCAGCCCACGGCCACCAGCATCTTCTCCAGCCGGAA 7801 Query 27008 TGAATTAGGGCAGGGTTGATGCCCTTTGCGCACCACTAGAATCTCTTGTTGGATAGGGAC 27067 || | |||||| | ||| || | | |||| || || |||||||| ||||| ||||| Sbjct 7802 GGAGTGGGGGCAGTGCTGAGGCTCCCTTCGCAGGACCAGGATCTCTTGCTGGATGGGGAC 7861 Query 27068 TGAGTTCATGTGGTAGTCTACATTCCCATCAGCATTAACACATCCTAAGTAGCGACACTT 27127 ||||||||||| | ||| || ||||| |||||||| ||||| || |||| || ||||| Sbjct 7862 GGAGTTCATGTGATGGTCCACCTTCCCTTCAGCATTGACACAGCCCAAGTGGCTGCACTT 7921 Query 27128 TGCTTCCCAAATCACAGAGGGATATCTATCTTGATCTTCATTGCG 27172 || ||||| ||||||||||| || || || || |||||||| Sbjct 7922 GGCCTCCCAGATCACAGAGGGGTACCTCTCAGAGTCCTCATTGCG 7966 >seq455 Length=298234 Score = 120 bits (132), Expect = 2e-22 Identities = 102/126 (81%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 4165 TTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGC 4224 ||||| ||||||| ||||| | ||||||||||||||| ||| |||||| ||||||||| Sbjct 71114 TTATAAACAGAACCGCCTCCCACTATCCAGACCATGTCCACTGTATTTGTTAATTCTGGT 71173 Query 4225 TGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGA 4284 || || |||||||||| ||| |||| | ||| || || | ||||||||||| |||||| Sbjct 71174 TGCTCAATAAGTTTTAAGGCACCATCCAGACTTTTGGCAAGAAAATGAGCTCCCTGTGGA 71233 Query 4285 AGCTCC 4290 | ||| Sbjct 71234 GGTTCC 71239 Score = 113 bits (124), Expect = 3e-20 Identities = 91/110 (83%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| ||||| | |||||||| | |||||||||| | ||||| || || |||||||| || Sbjct 77978 CTTGAGTTCTCTACTGAGAACTATATTAATTCTGTCCTTTAATGGTCGATTCTTCTCTGG 78037 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399 ||| |||||||| || || ||||||||||||| |||||||||||| ||| Sbjct 78038 AATGGAGAACCAGGTTTTCCTACCCATAATCACCAAATTCTGTTTACCTG 78087 Score = 111 bits (122), Expect = 1e-19 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 4056 AAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCAT 4115 |||||| ||||| || | ||||| |||||||||||| ||||||| |||||| || ||||| Sbjct 66819 AAGTTTATATTTTTCCAAATCAATTTCTGGAAAAAATGTGTCACTTTCAAATTCCTGCAT 66878 Query 4116 GATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACTCATAGCTTCTTT 4166 |||||| |||||||| ||| |||||| || ||| | |||| ||||| || Sbjct 66879 GATCCTTGTCACAAATAGTCTAAGATGGCCTGGCTTGTTCATGGCTTCCTT 66929 Score = 96.9 bits (106), Expect = 2e-15 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || |||||| ||||| |||||||||||||||||||||||||| | |||| Sbjct 58788 AAAACACTTTCACATTAATTGTTCTTTTCATATACTTCAAATTTGTACTTAATGCCTTTC 58847 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATAT 4047 || || || |||| |||| |||||| ||||||| Sbjct 58848 TCCTCCTGGACATCAGAAGGAACACCTGGATAT 58880 >seq4304 Length=228172 Score = 91.5 bits (100), Expect = 1e-13 Identities = 373/575 (65%), Gaps = 21/575 (4%) Strand=Plus/Minus Query 101539 AGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATAT-AATGTCATCTG 101597 |||||| | ||||||||| | || || || | ||| ||| ||| | || || || | Sbjct 3048 AGCCATTTCCATTTTAATAGTGGGATGGGGACTGTAGCCTTC-AATCTGAAAGTTTTCAG 2990 Query 101598 CTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGGTCTAG 101657 | || |||||||| || ||| |||| | | | | || |||| || || || | Sbjct 2989 CCTTGAAGTCATCGATTTTCTCAACTTTTCCAAGGATTTTGAGCTTTGGGAAAGGCCTTG 2930 Query 101658 GAGTTCGCGTCAACTGCATTTTAAG-AGCATCAATGTGATCTACATAGATGTGAGCATCT 101716 || | | ||||||||| || ||| ||||||||||| | || || || |||||| Sbjct 2929 ATTCTCCCTGAAGCTGCATTTTCAGCAGC-TCAATGTGATCAAGGTAAATATGTGCATCT 2871 Query 101717 CCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTT 101776 || | ||| || | | | || || ||| || |||| || || |||||| | || Sbjct 2870 CCCAAAGTGTGTACAGAGTCACCTGGCTTCAGGCCTGTGATGTGTGCGATCATGTAGGTG 2811 Query 101777 AAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGA 101836 | || | |||||| || ||||| || | ||| | | ||| | || |||| | || Sbjct 2810 AGCAGGGCATAGCTGGCGATGTTGAAGGACACACTCAGGCCCCTGTCTCCTGACTTCTGG 2751 Query 101837 TACAGTTGACAGGAAAG-CTT--TCCATCACAGACATAAAATTGACTTAATACATGACAA 101893 ||||| || ||||| || | | | |||||| || || || | | |||| || Sbjct 2750 TACAGCTG-CAGGACAGTCATGGTTCATCACG----TAGAAGTGGCAAAGGGCATGGCAC 2696 Query 101894 GGCGGCAACACCAT----TTT---AGGAATGTCTGAAACATTCCAAGCACACATTAACAT 101946 | |||| | | | ||||| ||| ||||||||||| | | || Sbjct 2695 AGGGGCAGGGTGGTGGGGTATGAGAGGAAGATCTTTCG-ATTCCAAGCACGTAGAATGAT 2637 Query 101947 CCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCC 102006 ||||| ||| | |||| ||||| || || ||||||| || || | |||||| ||||| Sbjct 2636 TCTTCTGTCTTCAAGGTTGGTTTTGATTGTGTCAATCACCTTTTGCAGTTGGTCTACTCC 2577 Query 102007 TTCTCCTTTAT-AATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAA 102065 || ||| || ||| | ||| |||| ||||| || | ||| |||||||||||| Sbjct 2576 TTGACCTGAATAAATTTAAATCCACATCTTTGTATTCGGCCACCAAAAGCCTCCACTGAA 2517 Query 102066 ATCCATACACAGGTCCAAGATCTCCTTCATCTCTG 102100 | | ||| || | || | || ||||| |||||| Sbjct 2516 AGCTATAAACTAGGCCTAAATTCCCTTCTTCTCTG 2482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360192087908807