Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_001416.1 Length=48502 Score E Sequences producing significant alignments: (Bits) Value seq160350 100 9e-17 seq43519 95.1 4e-15 seq66846 82.4 2e-11 >seq160350 Length=484 Score = 100 bits (110), Expect = 9e-17 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 7048 CGAAAAACTGGGTGACCACCGGCGATCCGGCGCGTGAGTTCACCATGATTCAGTCAGCAC 7107 |||||||||| ||| | |||| ||||||||||| || |||||||||||||| | | | | Sbjct 135 CGAAAAACTGTGTGCCTTCCGGGGATCCGGCGCGCGAATTCACCATGATTCAATAAACTC 194 Query 7108 CGCTGATGCTGCTGGCTGACCCTGATGAGTTCGTGTCCGTACAACTGG 7155 |||||||||||||| | |||||||| | ||| | ||| | |||||| Sbjct 195 CGCTGATGCTGCTGCCAGACCCTGACGCATTCATCTCCTTCAAACTGG 242 >seq43519 Length=5290 Score = 95.1 bits (104), Expect = 4e-15 Identities = 173/251 (69%), Gaps = 17/251 (7%) Strand=Plus/Plus Query 7090 CCATGATTCAGTCAGCACCGCTGATGCTGCTGGCTGACCCTGATGAGTTCGTGTCCGTAC 7149 |||||||||||||||| ||||||||||||||| | |||||||| | ||||| ||||| Sbjct 186 CCATGATTCAGTCAGCTCCGCTGATGCTGCTGCCAGACCCTGACGCATTCGTCTCCGTCA 245 Query 7150 AACTGGCGTAA--TC-----ATGGCCCTTCGGGGCCATTGTTTCTCTGTGGAGGAGT--C 7200 ||||||| ||| || ||||||| |||||| || | ||||| | | | Sbjct 246 AACTGGCATAACTTCCCCCAGTGGCCCTGTCGGGCCA-----CCTTTCTGGAGTATTTCC 300 Query 7201 CATGAC---GAAAGATGAACTGATTGCCCGTCTCCGCTCGCTGGGTGAACAACTGAACCG 7257 |||||| |||||| | ||||| || || || || || || || ||||| Sbjct 301 CATGACAGAGAAAGAAAAGCTGATCGCTCGCCTGAATGACCTTGGCACTCATCTTAACCG 360 Query 7258 TGATGTCAGCCTGACGGGGACGAAAGAAGAACTGGCGCTCCGTGTGGCAGAGCTGAAAGA 7317 || |||||| | || |||| | ||||| || | ||| | || |||||| |||| Sbjct 361 CGAGGTCAGCACCAGCGGTACGATTCAGGAACTTACGATGCGTATTGCTGAGCTGGAAGA 420 Query 7318 GGAGCTTGATG 7328 |||| | |||| Sbjct 421 GGAGTTGGATG 431 >seq66846 Length=6270 Score = 82.4 bits (90), Expect = 2e-11 Identities = 80/102 (78%), Gaps = 1/102 (1%) Strand=Plus/Minus Query 7046 CCCGAAAAACTGGGTGACCACCGGCGATCCGGCGCGTGAGTTCACCATGATTCAGTCAGC 7105 |||||||||||||||| | | || |||||| ||| || |||||||||||||| | Sbjct 6037 CCCGAAAAACTGGGTGCCGTCGGGGAATCCGGGGCGCGAAGA-ACCATGATTCAGTCCTC 5979 Query 7106 ACCGCTGATGCTGCTGGCTGACCCTGATGAGTTCGTGTCCGT 7147 ||| ||||||||||| | ||||||| || ||||| ||||| Sbjct 5978 TCCGGTGATGCTGCTGCCAGACCCTGTTGCATTCGTCTCCGT 5937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154641782530976