Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq6743 295 8e-75 seq2129 188 9e-43 seq11383 132 6e-26 seq1758 125 9e-24 seq449 120 4e-22 >seq6743 Length=91853 Score = 295 bits (326), Expect = 8e-75 Identities = 268/338 (79%), Gaps = 0/338 (0%) Strand=Plus/Plus Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116 ||||| || |||||||| ||||| | | | | |||| | ||||| ||||||||||||| Sbjct 33221 AGCAGAGCTTCGATGTCAGGCTCGATGTCGATGGTCAGAAAGCGGCGGCTGTACCTGCGT 33280 Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176 |||||| ||||| | ||||||| ||||||||||||||||||||| |||||||||||| Sbjct 33281 ACGGGCACACCGTCTGGGCCCACCAGGAACTTCTCGAAGTTCCAGGCAACGTCGTTGCGG 33340 Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236 ||||| |||||||||| |||| || |||||| ||| ||| | | |||||| || Sbjct 33341 CACACCGGAGACCAGGTGATGAACTTGGGGTCTGTCATGAGGGCAGTGGCGTCGTCACTG 33400 Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296 |||| ||||| ||||| || ||||||| |||||||||||||||| | | || || ||| Sbjct 33401 GGCGTGGGCAGAGCCTCCCGAAGGAAGGTGAAGAGCGGATGTGCCTTCTCGCCATTCACC 33460 Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356 |||||||||||||||||||| ||||| |||||||| ||| || || || |||| ||| Sbjct 33461 TCGCACTTCTCGAAGAGCATGAAGTTGGGCTCGAACCCGCCGCCTGGTCGTACGTACTTG 33520 Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTG 83394 ||| || || |||||| | |||| ||| |||||||| Sbjct 33521 AGGCAATTCAGGATCTCCTCGTTCTTGGCATTTTCCTG 33558 Score = 178 bits (196), Expect = 2e-39 Identities = 166/211 (79%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 |||| || || |||||||| |||||||| || ||||| ||||| ||||| | || |||| Sbjct 33831 CCTGATGCCCAAACTGGTTGCACGGGAAGCCGAGCACGACCAGGCCCCGGGGCCCGAGGC 33890 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 |||||||||| || |||||||| ||||| |||||||| || | |||||||| ||||| | Sbjct 33891 GCCGCTGCAGGTCATTCATCTGGGTGTAGTCCCGGACAGTTGTGCCTCAGAGCGACGCCA 33950 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGG 83570 | ||||| ||||||| ||| |||||| | | | || ||| |||| || || || |||| Sbjct 33951 CATTCTCAATGAGCAGCACCTTGCCCCGAAGGGACCCCAAGTTCACGGGCTCCCCGCCGG 34010 Query 83571 TAATCGGGCGTGCTGAGAAGGCGTACACAGA 83601 | ||| || || |||||||||||||| || Sbjct 34011 CCAGCGGACGCGCAGAGAAGGCGTACACCGA 34041 >seq2129 Length=184198 Score = 188 bits (208), Expect = 9e-43 Identities = 275/389 (71%), Gaps = 11/389 (3%) Strand=Plus/Plus Query 83158 CCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAG 83217 ||||||||| || |||| ||||| ||||||||| |||| | ||||||| || ||| Sbjct 92080 CCAGGCCACTTCTTTGCCACACACCAGAGACCAGGTGATGAACCTGGGGTCGGTCCTGAG 92139 Query 83218 CGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATG 83277 | | | | | || |||| ||||| ||||| || |||||| | |||||||| | Sbjct 92140 GGCAGTGGCGGTGACACTGGGCGTGGGCAGAGCCTCGCGAAGGAAGACAAAGAGCGGGTA 92199 Query 83278 TGCCCTTGCACCGTTGACCTCGC--------ACTTCTCGAAGAGCATAAAGTTCGGCTCG 83329 ||| | || || ||||||| |||||||||||||||| ||||| |||||| Sbjct 92200 CGCCTGCGAGCCATTCACCTCGCGCTTCTCCACTTCTCGAAGAGCATGAAGTTGGGCTCG 92259 Query 83330 AAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTT 83389 || | ||| || || | ||||| ||| ||| || || ||||||| || | |||||| Sbjct 92260 AACCTGTTGCCTGGTCTGACGTACTTGAGGCAATTCAGGATCTCG---TTTGGCGCGTTT 92316 Query 83390 TCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGG 83449 ||||| || | ||| |||| |||| ||| | ||||| ||||| || || | | ||| Sbjct 92317 TCCTGTTGCGCAAACCGGTTGCACGCGAAGCTGAGCACAACCAGGCCTCGGGGCTCGAGG 92376 Query 83450 CGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCT 83509 |||||| |||| | |||| ||| |||| ||| |||||| | |||| ||| || || Sbjct 92377 CGCCGCCTCAGCACTTTCACCTGTGTGTCATCCTGGACCGCTGTGCCTCCGAGCGATGCC 92436 Query 83510 ACGTTCTCGATGAGCAAGACCCGGCCCCG 83538 | || ||| ||||| | ||| |||||| Sbjct 92437 AAGTCCTCAGCGAGCAGGGCCCTGCCCCG 92465 >seq11383 Length=56749 Score = 132 bits (146), Expect = 6e-26 Identities = 183/253 (72%), Gaps = 5/253 (2%) Strand=Plus/Plus Query 83052 GGGGGAGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACC 83111 |||| |||||||| || ||| | | ||| | | | |||||| | ||||| |||||| | Sbjct 13636 GGGGCAGCAGGGCTTCAATGGCAGCCTCGAGGTCGAGGGTCAGAAAGCGGCGGCTGTGCG 13695 Query 83112 TGCGCACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGT 83171 || |||||| | | ||| | ||||||| || ||||| |||||||||||| |||||| Sbjct 13696 TGTGCACGG-CACACAGTCCGGGCCCACCAGGAGCTTCTGGAAGTTCCAGGCGACGTCGC 13754 Query 83172 TGCGGCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGT 83231 |||||||||| |||||||||| | ||||| | ||||| ||||||| | ||| | Sbjct 13755 TGCGGCACACCGGAGACCAGGTGAGGAGCTTGTGGTCGGTCACGAGGGCAGGGGCGTCCT 13814 Query 83232 CGCTAGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGT 83291 | || | || ||| | |||| || ||||||||||| | || ||| || |||| Sbjct 13815 CACT--GTGCGTGCATACCGCCTCGCAG--AGGCGAAGAGCCGGTGCGCCTGCGCGCCGT 13870 Query 83292 TGACCTCGCACTT 83304 | |||||| ||| Sbjct 13871 TCCCCTCGCCCTT 13883 >seq1758 Length=221896 Score = 125 bits (138), Expect = 9e-24 Identities = 163/224 (73%), Gaps = 1/224 (0%) Strand=Plus/Plus Query 83059 CAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGCAC 83118 |||||| | | || |||||||| | ||| ||| | ||| ||||||||||||| |||| Sbjct 191927 CAGGGCTCCAACGTTGGGCTCCATGTCCATGGTTAGAAAGCAGTGGCTGTACCTGTGCAC 191986 Query 83119 GGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCA 83178 ||| || | ||||||| ||||||||| ||||||||||||||||| ||| ||| Sbjct 191987 AGGCACATTGTTGGGGCCCACCAGGAACTTCTCCAAGTTCCAGGCCACGTCACTGCAGCA 192046 Query 83179 CACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGG 83238 ||||| |||||||| | | || |||| | ||| ||| | | || ||| | | Sbjct 192047 CACTGAAGACCAGGTGAAGCACTTGGGGCCAGTCATGAGTGCAGGGACGTTGTCATTGGA 192106 Query 83239 CGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCC 83282 ||||||||| ||||| | | |||||| ||| ||| ||||||| Sbjct 192107 CGCCGGCAGAGCCTCAGGAAAGAAGGC-AAGTGCGAGTGTGCCC 192149 >seq449 Length=297455 Score = 120 bits (132), Expect = 4e-22 Identities = 206/290 (71%), Gaps = 13/290 (4%) Strand=Plus/Plus Query 50410 GCACCTGCGCAAGATGTACGGCGCAAGCAG---GTCTATCTACAACTTCGCTGTGCGTAT 50466 ||| ||||||| || |||| |||||| ||| || |||||| || || | Sbjct 128742 GCAGCTGCGCAGCATCTACGA---AAGCAGCCTGTCCATTGGCAACTTTGCCTCACGCCT 128798 Query 50467 GCTCGTGTACATGTTTCCAGAGCTCTTTACTGCGGAGAACCTGCACACGCACTTCAACTG 50526 ||||||| || |||| || |||||||| || |||||||||| || ||| | |||||| Sbjct 128799 GCTCGTGCACCTGTTCCCCGAGCTCTTCACCCACGAGAACCTGCGCAAGCAGTACAACTG 128858 Query 50527 CTACGGCTCCATGGGCAAGC-GCAGGCTCGACCCGCTACGCCTGCGCTTGCTCCGGCACT 50585 | |||||| |||||||| |||| || |||||| ||| | | |||| |||| Sbjct 128859 CAGCGGCTCGCTGGGCAAGAAGCAG-CTGGACCCGTCCCGCATCAAGCTCATCCGCCACT 128917 Query 50586 ATGTGCAGTTGCTGCACCCGGCGGCGCGCAACGAGCGCGTGTGGATCACAA-AGTTCCTG 50644 | |||||| |||| ||||| ||| || || ||||| |||| ||| ||||| || Sbjct 128918 ACGTGCAGCTGCTCTACCCGCGGGCCAAGAATGACCGCGTCTGGA-CACTGGAGTTCGTG 128976 Query 50645 GCGTGCCTGGACGAGCGCTGCCGGCGCCGCTGCGCACGGA-CACAGGCGC 50693 | ||||||||||||||||||||||| | |||||| || |||||| Sbjct 128977 GGCAAACTGGACGAGCGCTGCCGGCGCCG--GGACACGGAGCAGAGGCGC 129024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 606966170852280