Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq2230 167 2e-36 seq1971 167 2e-36 seq4569 104 2e-17 >seq2230 Length=225668 Score = 167 bits (184), Expect = 2e-36 Identities = 308/446 (69%), Gaps = 13/446 (3%) Strand=Plus/Minus Query 15959 ACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAA 16018 |||||||| ||||||| || || || ||||| |||||||| |||||||| ||||| Sbjct 225364 ACTCTCTTCCCAAAGAAGTTAGTCTTCCCTTCCG-TGAAATATCCTCCATAAAGTCAAAT 225306 Query 16019 GGATTTTTTGAACAATAGTATTTATCGC---ATCCCAATTCCAACAATAATCTATCCGCC 16075 ||||||| | || | | | | || | |||| |||| || | ||| || ||| Sbjct 225305 GGATTTTCT--ACTCT-GAAAACCTTGCTAAAACCCACCTCCAGCATAAGTCTGTCTGCC 225249 Query 16076 ACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATT 16135 || ||||| | ||||| ||||| ||| | || ||||| || || | | || | | Sbjct 225248 ACGAATTCGACGTACTGCTTCATCAAAGCGCAATTCATCCCGATGAGCTCCACTGTCAGG 225189 Query 16136 GCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTTACTACA 16195 |||||||| | || | | |||||| || | || | |||||| ||| | ||| Sbjct 225188 GCTTCTGTGAGGAACTCGTGTTCTATCCTAGCTGCACTGACGATTATTTCTTTGACT--- 225132 Query 16196 CTATTTAACGGAGGGTT---TAATAAGTGTTTAAACATTATACAAGCAAAATCACAATGC 16252 || | || | | || || | |||||| ||||| | || ||||| ||||| || Sbjct 225131 CTCTGCTCCGAATGTTTGTGTAGCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGT 225072 Query 16253 AATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGT 16312 || || ||||| || || || | || || |||||||| || || | ||| ||||||||| Sbjct 225071 AAACCCTCGTCTCTGCTAATAAGATCATTGGAAAATGTGAGGCCGGCCATCAGTCCTCGT 225012 Query 16313 TTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCA 16372 || || | ||| ||||||| ||||| || ||||||||||| || ||||| ||||| || Sbjct 225011 TTCTTGAGCCACAATATAGATGCAAAAGACCCAGAAAAGAAGATTCCTTCCGCTGCGACA 224952 Query 16373 AATGCAACCAATCGCTCACCGTACGT 16398 || || || | | || |||||||| Sbjct 224951 AAGGCTACGACAGGTTCTCCGTACGT 224926 >seq1971 Length=167910 Score = 167 bits (184), Expect = 2e-36 Identities = 305/447 (68%), Gaps = 0/447 (0%) Strand=Plus/Minus Query 16219 GTGTTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTC 16278 |||||| ||||| | || ||||| ||||| || || || ||||| || || || | || Sbjct 91547 GTGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTC 91488 Query 16279 GTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAA 16338 || |||||||| || || | ||| ||||||||||| || | ||| ||||||| ||||| Sbjct 91487 ATTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATATAGATGCAAA 91428 Query 16339 TGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGT 16398 |||||||||||||| || ||||| ||||| |||| || || | | || |||||||| Sbjct 91427 AGAACCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGCTACGACAGGTTCTCCGTACGT 91368 Query 16399 TCTAtttttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCAT 16458 | ||| ||| |||| ||||||| ||| | || ||||| || Sbjct 91367 AGCCTCTTTGTCTTCGATCCGGCGCAAGGCCCAATCTGCCGCCTTCTTTACACAAGGCAC 91308 Query 16459 GTTCTCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTAT 16518 |||| | ||||| || | | | |||||||| |||| ||| ||||| || || Sbjct 91307 TGTCTCACTGGCATTGAAGAGGAATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAAT 91248 Query 16519 TAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCA 16578 || | ||| | |||||| |||| || || |||| || || || || ||||| || | Sbjct 91247 GAGGAGACTGTCCATTTCACAATGTATGTTTTCCACGGCAATTTGGAAGCCATAGAAATA 91188 Query 16579 TCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTAT 16638 | ||||| | || || ||||| | || || || | ||||||| || ||||| Sbjct 91187 ACGGGCTTCCGTAATCTGAACTTCTTGGCTAAGCCGCTCCACCCAGTTTTCATTTACTAT 91128 Query 16639 TCCATCGCTAGCTGCAAAAAACGCAAG 16665 | ||| || |||||| | || || || Sbjct 91127 GCTATCACTTGCTGCAGAGAAAGCCAG 91101 Score = 107 bits (118), Expect = 2e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318 ||||| || || || | || || |||||||| || || ||||| |||||||||||||| Sbjct 88600 TCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTTTG 88541 Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378 | ||| ||||| | ||||| |||||||||||||| || ||||| ||||| ||||| || Sbjct 88540 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGGCT 88481 Query 16379 AC 16380 || Sbjct 88480 AC 88479 >seq4569 Length=138791 Score = 104 bits (114), Expect = 2e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 15885 TTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTT 15944 |||||||||| ||||| | || ||||||||| | | | | |||||||| | Sbjct 47467 TTTAAAAATCTGCATCTAAGGTGAAGACATTATCTGTAGTTTCCGCCATAACTGCAAAAC 47408 Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004 |||||| || ||||| || ||||||||||||||||| || ||||| ||||| || | Sbjct 47407 GTTGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCCTCTAAAGAAATGTTCT 47348 Query 16005 CCATAAAATCAAAAGGATTTTT 16026 ||||||||||||| |||||||| Sbjct 47347 CCATAAAATCAAAGGGATTTTT 47326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461121243760200