Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq2230 167 2e-36
seq1971 167 2e-36
seq4569 104 2e-17
>seq2230
Length=225668
Score = 167 bits (184), Expect = 2e-36
Identities = 308/446 (69%), Gaps = 13/446 (3%)
Strand=Plus/Minus
Query 15959 ACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAA 16018
|||||||| ||||||| || || || ||||| |||||||| |||||||| |||||
Sbjct 225364 ACTCTCTTCCCAAAGAAGTTAGTCTTCCCTTCCG-TGAAATATCCTCCATAAAGTCAAAT 225306
Query 16019 GGATTTTTTGAACAATAGTATTTATCGC---ATCCCAATTCCAACAATAATCTATCCGCC 16075
||||||| | || | | | | || | |||| |||| || | ||| || |||
Sbjct 225305 GGATTTTCT--ACTCT-GAAAACCTTGCTAAAACCCACCTCCAGCATAAGTCTGTCTGCC 225249
Query 16076 ACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATT 16135
|| ||||| | ||||| ||||| ||| | || ||||| || || | | || | |
Sbjct 225248 ACGAATTCGACGTACTGCTTCATCAAAGCGCAATTCATCCCGATGAGCTCCACTGTCAGG 225189
Query 16136 GCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTTACTACA 16195
|||||||| | || | | |||||| || | || | |||||| ||| | |||
Sbjct 225188 GCTTCTGTGAGGAACTCGTGTTCTATCCTAGCTGCACTGACGATTATTTCTTTGACT--- 225132
Query 16196 CTATTTAACGGAGGGTT---TAATAAGTGTTTAAACATTATACAAGCAAAATCACAATGC 16252
|| | || | | || || | |||||| ||||| | || ||||| ||||| ||
Sbjct 225131 CTCTGCTCCGAATGTTTGTGTAGCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGT 225072
Query 16253 AATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGT 16312
|| || ||||| || || || | || || |||||||| || || | ||| |||||||||
Sbjct 225071 AAACCCTCGTCTCTGCTAATAAGATCATTGGAAAATGTGAGGCCGGCCATCAGTCCTCGT 225012
Query 16313 TTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCA 16372
|| || | ||| ||||||| ||||| || ||||||||||| || ||||| ||||| ||
Sbjct 225011 TTCTTGAGCCACAATATAGATGCAAAAGACCCAGAAAAGAAGATTCCTTCCGCTGCGACA 224952
Query 16373 AATGCAACCAATCGCTCACCGTACGT 16398
|| || || | | || ||||||||
Sbjct 224951 AAGGCTACGACAGGTTCTCCGTACGT 224926
>seq1971
Length=167910
Score = 167 bits (184), Expect = 2e-36
Identities = 305/447 (68%), Gaps = 0/447 (0%)
Strand=Plus/Minus
Query 16219 GTGTTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTC 16278
|||||| ||||| | || ||||| ||||| || || || ||||| || || || | ||
Sbjct 91547 GTGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTC 91488
Query 16279 GTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAA 16338
|| |||||||| || || | ||| ||||||||||| || | ||| ||||||| |||||
Sbjct 91487 ATTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATATAGATGCAAA 91428
Query 16339 TGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGT 16398
|||||||||||||| || ||||| ||||| |||| || || | | || ||||||||
Sbjct 91427 AGAACCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGCTACGACAGGTTCTCCGTACGT 91368
Query 16399 TCTAtttttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCAT 16458
| ||| ||| |||| ||||||| ||| | || ||||| ||
Sbjct 91367 AGCCTCTTTGTCTTCGATCCGGCGCAAGGCCCAATCTGCCGCCTTCTTTACACAAGGCAC 91308
Query 16459 GTTCTCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTAT 16518
|||| | ||||| || | | | |||||||| |||| ||| ||||| || ||
Sbjct 91307 TGTCTCACTGGCATTGAAGAGGAATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAAT 91248
Query 16519 TAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCA 16578
|| | ||| | |||||| |||| || || |||| || || || || ||||| || |
Sbjct 91247 GAGGAGACTGTCCATTTCACAATGTATGTTTTCCACGGCAATTTGGAAGCCATAGAAATA 91188
Query 16579 TCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTAT 16638
| ||||| | || || ||||| | || || || | ||||||| || |||||
Sbjct 91187 ACGGGCTTCCGTAATCTGAACTTCTTGGCTAAGCCGCTCCACCCAGTTTTCATTTACTAT 91128
Query 16639 TCCATCGCTAGCTGCAAAAAACGCAAG 16665
| ||| || |||||| | || || ||
Sbjct 91127 GCTATCACTTGCTGCAGAGAAAGCCAG 91101
Score = 107 bits (118), Expect = 2e-18
Identities = 97/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318
||||| || || || | || || |||||||| || || ||||| ||||||||||||||
Sbjct 88600 TCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTTTG 88541
Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378
| ||| ||||| | ||||| |||||||||||||| || ||||| ||||| ||||| ||
Sbjct 88540 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGGCT 88481
Query 16379 AC 16380
||
Sbjct 88480 AC 88479
>seq4569
Length=138791
Score = 104 bits (114), Expect = 2e-17
Identities = 108/142 (76%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 15885 TTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTT 15944
|||||||||| ||||| | || ||||||||| | | | | |||||||| |
Sbjct 47467 TTTAAAAATCTGCATCTAAGGTGAAGACATTATCTGTAGTTTCCGCCATAACTGCAAAAC 47408
Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004
|||||| || ||||| || ||||||||||||||||| || ||||| ||||| || |
Sbjct 47407 GTTGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCCTCTAAAGAAATGTTCT 47348
Query 16005 CCATAAAATCAAAAGGATTTTT 16026
||||||||||||| ||||||||
Sbjct 47347 CCATAAAATCAAAGGGATTTTT 47326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 461121243760200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |