Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq14408 2051 0.0 seq11145 95.1 8e-15 >seq14408 Length=38006 Score = 2051 bits (2274), Expect = 0.0 Identities = 1488/1727 (86%), Gaps = 46/1727 (3%) Strand=Plus/Minus Query 107068 CCAG-TCCTAACTCCAGTCCCAGCATGACTAGCTGGTTTGCAGCATCAGGTTACAGATGT 107126 |||| |||| | |||||| ||||||||| |||||||||| || ||||| || ||| | Sbjct 6634 CCAGATCCTGATTCCAGTGCCAGCATGATCAGCTGGTTTGTAGTGTCAGGCTATAGACCT 6575 Query 107127 CCATC-------------CACAAGGGTCTTAGGCAGGACTTGACTGAGGATATTTGTCTA 107173 ||||| || | | || |||||||||||||||||||| |||||||||| Sbjct 6574 CCATCAGTGAGCTGGGTGCATGAAGTTCCTAGGCAGGACTTGACTGAGGGTATTTGTCTA 6515 Query 107174 TAGAAGACATCTATCTTTACCATCACTCTGGAGTTGAACTTGATGTTC--------TG-- 107223 |||||| | || | ||| |||||||| |||||||||||||||||||| || Sbjct 6514 GAGAAGAAACCTGTTTTTGCCATCACTTTGGAGTTGAACTTGATGTTCCTTGAGCATGTT 6455 Query 107224 ---GATTAGTTTGTAATTAAAGGCATTTTGTTCTGTCCAAGGATCTCCTCCTCCACCTTG 107280 | ||||||||||| | ||||||||||||||||||||||||| || |||||| |||| Sbjct 6454 CCAGGTTAGTTTGTAACTGAAGGCATTTTGTTCTGTCCAAGGATTTCATCCTCCTCCTTC 6395 Query 107281 CCTGTGCCCAAACTCTCCTGATCTCCCATCCCATGAAGATGGCTGGGTGGAAGAAGAAGC 107340 |||||||||||||||| | |||||||||| ||||||||||| ||||||||||||||| | Sbjct 6394 CCTGTGCCCAAACTCTACCGATCTCCCATTCCATGAAGATGATTGGGTGGAAGAAGAAAC 6335 Query 107341 TTTGCCGGGGACATCATCTGTGGGCCCTGGGCTGCTATATGCTGCTGGCCGTTGTTTCTC 107400 | ||| |||| ||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct 6334 TCTGCAGGGGGCATCACCTGTGGGCCCTGGGCTGCTATATGCTGCTGGCCGTTGTTGCTC 6275 Query 107401 TGAGACTTTCCCTCAGGTTTAAATGTGATGTAGATTCCTTGGATCTGGAGTCCAGGGACT 107460 |||||||||| |||||||| |||||||| |||||||| |||||||||| |||||||||| Sbjct 6274 TGAGACTTTCTCTCAGGTTAAAATGTGACATAGATTCCCTGGATCTGGAATCCAGGGACT 6215 Query 107461 TCCAGAGTCAGCACTGTAGGGACATGTTGTACAATAGCCTGAAGCTGCCAGCAAAGAGAT 107520 | | || |||| |||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 6214 TTCGAAGCCAGCGCTGTAGGGACATCTTGTACAAGTCCCTGAAGCTGCCAGCAAAGAGAT 6155 Query 107521 CCATCAACTGTTCTGGGATCACGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAG 107580 ||||||||||||||||| |||| ||||||||||||||||||||| || |||| ||||| | Sbjct 6154 CCATCAACTGTTCTGGGGTCACCCGAGGGGACCAGGAAGCAGTGCTCAAGGCTCTCCTGG 6095 Query 107581 ACAACCTGGAAGTGAAGAAAAAGCGGTCGCCTCTCACTGGCACCTATTACCTCAACATAA 107640 |||| ||||| || ||||| |||||| |||| |||| | |||| ||||||||||||| | Sbjct 6094 ACAATCTGGAGGTCAAGAAGAAGCGGGAGCCTTTCACAGACACCGATTACCTCAACATGA 6035 Query 107641 CCAGAGACTGTGAGCGCTTCAAGGCCCAAAGGAAGTTCATACAGTTCCCACTGAGTAAAG 107700 ||||||| ||||||| || ||| ||||||||||||||||||||||||||||||| |||| Sbjct 6034 CCAGAGATTGTGAGCAGTTTAAGTCCCAAAGGAAGTTCATACAGTTCCCACTGAGCAAAG 5975 Query 107701 AAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTG 107760 ||||| ||||||||||||| || ||||| |||||||||||||||||||||||||||||| Sbjct 5974 AAGAGTTAGACTTCCCCATCGCATACTCTGTGGTGGTCCATGAGAAGATTGAAAACTTTG 5915 Query 107761 AACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGA 107820 |||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| || Sbjct 5914 AACGGCTGCTGCGAGCTGTGTATGCCCCTCAGAACATATACTGCGTCCATGTGGATGAGA 5855 Query 107821 AGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCT 107880 |||||||||| |||||||||||||| |||| ||||||||||||||||||||| ||||||| Sbjct 5854 AGTCCCCAGAAACTTTCAAAGAGGCAGTCAGGGCCATTATTTCCTGCTTCCCAAATGTCT 5795 Query 107881 TCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACC 107940 ||||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||||| Sbjct 5794 TCATGGCCAGTAAGTTGGTCCGAGTGGTTTACGCCTCCTGGTCCAGGGTGCAGGCTGACC 5735 Query 107941 TGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACAT 108000 ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||| Sbjct 5734 TGAACTGTATGGAAGACTTGCTCCAGAGCTCGGTGCCTTGGAAATACTTACTGAATACAT 5675 Query 108001 GCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGA 108060 | |||||||| || || |||||||||||||| |||| ||||||||||||||||||||||| Sbjct 5674 GTGGGACAGATTTTCCTATAAAGACCAATGCTGAGACGGTCCTGGCCCTCAAGATGTTGA 5615 Query 108061 AGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAAT 108120 | || ||||||||||||||||| ||| ||||| |||||| |||||| ||||||||||| Sbjct 5614 ATGGGAAGAACAGTATGGAGTCCGAGATACCTACTGAGTACAAAAAGTCTCGCTGGAAAT 5555 Query 108121 ACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTG 108180 ||| |||||||||||||||||| || ||| |||||||||||||||||||||||||||| Sbjct 5554 ACCACTATGAGGTGACAGACACGTTGCACCTAACCAGCAAGATGAAGGACCCTCCCCCTG 5495 Query 108181 ATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAAC 108240 |||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 5494 ATAACTTACCCGTGTTCACAGGGAATGCCTATTTTGTGGCTTCTCGAGCCTTTGTCCAAC 5435 Query 108241 ATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCC 108300 |||||||||| ||||| ||||||||| ||||| | ||||||| |||||||||||||||| Sbjct 5434 ATGTCTTAGAGAACCCCAAATCCCAACGACTGATCGAATGGGCAAAAGACACCTATAGCC 5375 Query 108301 CCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGATGCCTGGCTCTGTTCCTA 108360 | || ||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 5374 CTGATGAACACCTCTGGGCCACCCTTCAGCGTGCACCGTGGATGCCTGGCTCTGTCCCCT 5315 Query 108361 GCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGT 108420 |||||| |||| |||||||||||||||||| ||||| |||||||| ||||| ||||||| Sbjct 5314 ACCACCCGAAGTTTCACATCTCAGACATGACCGCCATTGCCAGGCTGGTCAAATGGCAGT 5255 Query 108421 ACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGA 108480 |||||||||||| |||| |||||||||||||||||||| |||||||||||||| | | Sbjct 5254 TCCACGAGGGAGACATCAGTATGGGGGCGCCTTATGCACCTTGCTCTGGAATCCACCAGC 5195 Query 108481 GGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCT 108540 |||| ||||||||||| ||||| ||||||||| |||||||||| |||| |||||||||| Sbjct 5194 GGGCTATCTGCATTTATGGGGCTGGGGACCTGCACTGGATTCTTCAGAGTCATCACCTCT 5135 Query 108541 TGGCAAACAAGTTTGACCCGAGGGTGGATGATAACGTCCTGCAGTGCTTAGAAGAGTACC 108600 |||| |||||||||||||| | |||||||||||| || |||||||| ||||||||||| Sbjct 5134 TGGCGAACAAGTTTGACCCAAAGGTGGATGATAATGTTCTGCAGTGTTTAGAAGAGTATT 5075 Query 108601 TACGTCATAAGGCCATCTATGGGACTGAACTTTGAGCTGCACTGT--------------- 108645 ||||| ||||||||||||||||||||||||| |||| | ||| || Sbjct 5074 TACGTTATAAGGCCATCTATGGGACTGAACTCTGAGATACACCGTGAGAGGATTGCTACC 5015 Query 108646 ---GGGCCAGGGAC-TGTGCCAACATGCCCAGGGCGTACTGGTACTGTGTGGGGTGGGGG 108701 ||| |||| || ||| | ||| ||||||| | | |||| || |||||||||||| | Sbjct 5014 CAGGGGGCAGGAACATGTACAAACGTGCCCAGAACATGCTGGGACAGTGTGGGGTGGGAG 4955 Query 108702 ACGAGGGCTGTGGAATCCATGGCATCCCCCAGGGTCAGAGGGCTGCT 108748 | |||||| |||||||| ||||||| ||| ||||||| |||||||| Sbjct 4954 AGCAGGGCTCTGGAATCCGTGGCATCTCCCTGGGTCAGGGGGCTGCT 4908 >seq11145 Length=73809 Score = 95.1 bits (104), Expect = 8e-15 Identities = 563/891 (63%), Gaps = 33/891 (4%) Strand=Plus/Plus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 || || ||||| |||||| ||| || || || || || || | ||||| ||| | || Sbjct 30254 CCCCTTAGTAAGGAAGAGGCAGAGTTTCCAATAGCATATTCTGTAGTGGTTCATCACAAA 30313 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 ||||||| |||| |||| ||| | ||| | ||| |||||||| | || || | Sbjct 30314 ATTGAAATGCTTGACAGGCTCCTGAGGGCCATTTATATGCCTCAGAATTTCTATTGCATT 30373 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 ||||||||| || || || | || | ||||| | | |||| ||||| Sbjct 30374 CACGTGGATACAAAATCAGAGGAATCCTTTTTGGCCGCGGTGATTGGCATTGCATCCTGT 30433 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 ||| |||||||| |||||||| || ||| || || ||||| || ||| | | Sbjct 30434 TTCAGTAATGTCTTTGTGGCCAGTCAGCTGGAGAGCGTTGTGTATGCATCTTGGAGCCGG 30493 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCA--TGGAAGT 107985 || || |||||||| ||||| ||| | ||| | || | || | | || ||||||| Sbjct 30494 GTCCAGGCTGACCTCAACTGCATGCAGGACCT-CTACCGAA-TGAACGCAGACTGGAAGT 30551 Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGG 108045 |||| | ||| ||||| | || || || || || ||||| || || ||| | Sbjct 30552 ACTTGATAAATCTCTGCGGTATGGATTTTCCTATTAAAACCAACCTGGAAATTGTCAGGA 30611 Query 108046 CCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAG---GTACCTTCTGAGTCCa 108102 |||||| ||| | ||| |||| | | || | ||| | || || | | Sbjct 30612 AGCTCAAGTCGTTAATGGGCGAGAATAACCTAGAAACGGAGAGAATGCCATCCAA---TA 30668 Query 108103 aaaaaaaTCGCTGGAAATACCGCTATG-AG--GTGACAGACACACTGTACCCTACCAGCA 108159 ||||| | | |||||| | | |||| || |||| | | || || | || Sbjct 30669 AAAAAGAAAGGTGGAAAAAGCATTATGCAGTCGTGAATGGAAAGTTG------ACAAACA 30722 Query 108160 AGATGAAGGAC------CCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATT 108213 | || ||| | ||| ||| | | ||| |||| |||| | |||||||| Sbjct 30723 TGGGGACCGACAAAATACATCCTCCTCTTGAAACACCTCTGTTTTCAGGCAGTGCCTATT 30782 Query 108214 TTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGG 108273 |||||| | | | | ||| | |||| | || || ||| |||| | Sbjct 30783 TTGTGGTCAGTAGGAGGTATGTGGAGTATGTGCTCGAGAATGAAAAAATACAAAAGTTTA 30842 Query 108274 TTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTG 108333 | || |||| |||||||| || ||||| ||||| | ||||||||||| ||||| | | Sbjct 30843 TGGAGTGGGCAAAAGACACATACAGCCCGGACGAGTATCTCTGGGCCACTATTCAGAG-G 30901 Query 108334 CTCCGTGGA-TGCCTGGCTCTGT-TCCT--AGCCACCCCAAGTATCACATCTCAGACATG 108389 ||| | | | || || || | |||| ||||| ||||| | || || |||||| Sbjct 30902 ATCCCCGAAGTCCCAGGGTCACTGTCCTTAAGCCA---TAAGTACGATATGTCCGACATG 30958 Query 108390 ACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCG 108449 || || |||||| | ||||||||||||||| || || || | || ||| || Sbjct 30959 CAAGCAATTGCCAGGTTTGTCAAGTGGCAGTACTTTGAAGGTGACATTTCCAAGGGCGCC 31018 Query 108450 CCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGAC 108509 || || | || ||| || |||| | | || | ||| ||| ||| || || ||| Sbjct 31019 CCCTACCCGCCGTGCAGCGGCGTCCACGTGCGCTCCGTGTGCGTTTTCGGAGCGGGTGAC 31078 Query 108510 CTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCG 108560 || ||||||| || | || ||| | || || |||||||| ||| || Sbjct 31079 TTGAACTGGATGCTGCGTGTGCACCACTTGTTCGCCAACAAGTTCGACACG 31129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347247749559018