Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq15 125 6e-24 seq12339 96.9 3e-15 >seq15 Length=680746 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| ||| || ||||| ||||||||||| ||| ||| | || ||| Sbjct 220095 ACCAGGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 220036 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || || || ||||||| ||| ||||| || || | |||||||||||| Sbjct 220035 AGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 219976 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | |||| | ||||||||||| ||| || |||||| Sbjct 219975 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 219916 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| |||||||| ||||| ||||| Sbjct 219915 CCAGTCAGGGTCTTCACGAAGATCTGCAT 219887 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||| | | | |||| |||||| ||| ||| ||||| ||||||||||| | Sbjct 219201 CCACCTCTGAGGCGAAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAC 219142 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || ||||| ||||| ||||| || |||| | ||| ||||| || || Sbjct 219141 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGTCTCTGCTGGTCTGGTGGG 219082 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||| || || || || ||| || | | | | |||| | ||||||| Sbjct 219081 ATGCCCTCTTTTTCTTGGATCTTCCCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 219022 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||| || ||||| || |||| |||||||| ||||| ||||| Sbjct 219021 TCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 218975 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| |||| | | || | |||||| || ||| ||||| |||||||| || Sbjct 219429 CCACCCCTCAGACGGAGGACAAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAG 219370 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || ||||| ||||| || || || |||| || ||| ||||| || || Sbjct 219369 AGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATCAGCCTCTGCTGGTCTGGGGGG 219310 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||| ||| || || ||| || | | | | |||| | ||||||| Sbjct 219309 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 219250 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||| || |||||||| ||||| |||||||| ||||| ||||| Sbjct 219249 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 219203 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| |||| | | || | |||||| || ||| ||||| |||||||| || Sbjct 219657 CCACCCCTCAGACGGAGGACAAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAG 219598 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || ||||| ||||| || || || |||| || ||| ||||| || || Sbjct 219597 AGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATCAGCCTCTGCTGGTCTGGGGGG 219538 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || || || ||| || || ||| || | | | | |||| | ||||||| Sbjct 219537 ATGCCTTCTTTATCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 219478 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||| || |||||||| ||||| |||||||| ||||| ||||| Sbjct 219477 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 219431 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 |||||| || ||| ||||| |||||||| || || ||| | || ||||| || Sbjct 219862 GTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTG 219803 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 ||| || || || |||| || ||| ||||| || || | || || || ||| || || Sbjct 219802 TTTGCCTGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCTTTATCCTGGATCTT 219743 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | | |||| | ||||||||||| ||| || |||||||| || Sbjct 219742 GGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGT 219683 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 ||| |||||||| ||||| ||||| Sbjct 219682 CAGGGTCTTCACGAAGATCTGCAT 219659 >seq12339 Length=50223 Score = 96.9 bits (106), Expect = 3e-15 Identities = 159/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| |||| | | |||| |||||| || ||| ||||| |||||||| || Sbjct 7507 GCCACCCCTCAGACGAAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGA 7566 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || ||| | || ||||| ||||| || || || || | || ||| ||||| || || Sbjct 7567 GAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGG 7626 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | || ||||| ||| | | || ||| || | | | | |||| | |||||| Sbjct 7627 GATGCCTTCCTTATCCTGA-TCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCAC 7685 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| ||| || |||||||| ||||| |||||||| ||||| ||||| Sbjct 7686 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 7733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 393916923096697