Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq3161 111 1e-19
seq24761 104 2e-17
seq2586 95.1 1e-14
seq4730 86.0 6e-12
>seq3161
Length=206284
Score = 111 bits (122), Expect = 1e-19
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107
||||| |||||| || || ||||| ||||| || || || ||||| || || |||||
Sbjct 157591 ACCTCATCTTTGCTGGTATATTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTT 157532
Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167
|| | || ||||||||| || ||||| || ||||| ||||||||||||||||| ||
Sbjct 157531 CCTAGGTTCTGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTA 157472
Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196
|| ||||| ||| ||||| ||||| ||
Sbjct 157471 CCTGTCTCTGTCTGAGACTCAATGATGGC 157443
>seq24761
Length=36067
Score = 104 bits (114), Expect = 2e-17
Identities = 156/218 (72%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 31194 TGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCG 31253
|||| |||||||| ||||| |||||||| || || ||||| |||| |||||||| || |
Sbjct 10754 TGCAGATTTTCGTGAAGACCCTGACAGG-AAGACCATCACTCTCGAGGTTGAACCCTCGG 10696
Query 31254 ACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGC 31313
| | | |||| || || | || |||||||||||| | | || |||||||
Sbjct 10695 ATACAATAGAAAATGTAAAGGCTAAGATCCAGGACAAGGAAGGAATTTCCCCTGACCAGC 10636
Query 31314 AGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAAC 31372
|| | || || || |||||||| || ||||||| | | | ||| || || || |||
Sbjct 10635 AGAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGTACTTTGTTTGACTACAAC 10577
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
|||||||| | || ||||||||| | || | |||||
Sbjct 10576 ATTCAAAAGGGGTCCACTCTTCATATTGTGTTGAGACT 10539
>seq2586
Length=172570
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/209 (71%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 31194 TGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCG 31253
|||| |||||||| ||||| | ||| || || || ||||| |||| || ||||| || |
Sbjct 46898 TGCAGATTTTCGTGAAGACCCAGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTCGG 46839
Query 31254 ACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGC 31313
| || |||| || || | || |||||||||||| | || || |||||||
Sbjct 46838 ATGCAGTAGAAAACGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAGC 46779
Query 31314 AGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAAC 31372
| | || || || |||||||| || ||||||| | | | ||| || || || |||
Sbjct 46778 AAAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGTACTTTGTCTGACTACAAC 46720
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401
||||| || || || ||||||||||| ||
Sbjct 46719 ATTCAGAAGGAGTCCACTCTTCATCTTGT 46691
>seq4730
Length=198489
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/222 (70%), Gaps = 6/222 (3%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|||||||| ||||| || ||||| ||||| || || || |||| |||| || |||||
Sbjct 50816 AACATGCAGATTTTTGTGAAGACCCTGACGGGGAAGACCGTCACTCTCGAGGTCGAACCC 50875
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | || | || || | || |||||||||||| | || || |||
Sbjct 50876 TCGGATACGATAGAGAATGTAAAGGTCAAGATCCAGGACAAGGAAGGAATTCCTCCTGAC 50935
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
||||| | || || || |||||||| || ||||||| | ||| ||| || || |
Sbjct 50936 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGATGTACT-TG---GACCA 50990
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
|||| |||| | || || ||||||||||| || | |||||
Sbjct 50991 CAACACTCAAGAGGAGTCCACTCTTCATCTTGTGTTGAGACT 51032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444425997151440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |