Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1971 89.7 1e-12
seq2230 87.8 4e-12
>seq1971
Length=167910
Score = 89.7 bits (98), Expect = 1e-12
Identities = 115/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| ||||||| |||| ||||||||||||||| |||| | || ||||| || || |||
Sbjct 91386 GTAGCCTTTGTCGCAGCGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCTATATTGTGG 91445
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
||||||| | || | || | || ||||| | |||||||| | ||| || |||
Sbjct 91446 CTCAAGAAACGAGGACTGATGGCCGGCCTCACATTTTCCAATGAACTTATTAGCAGAGAC 91505
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAA 102076
|| ||| | || | |||||||| ||| || |||| |||
Sbjct 91506 GAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCAAA 91544
Score = 86.0 bits (94), Expect = 1e-11
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| |||||||||||||| ||||||||||||||| |||| | || ||||| || ||||||
Sbjct 88479 GTAGCCTTTGCTGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCGATATTCTGG 88538
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
|||| || | || | |||| || ||||| | |||||||| | ||| || |||
Sbjct 88539 CTCAAAAAACGAGGACTGATGCCCGGCCTCACATTTTCCAATGAACTTATTAGCAGAGAC 88598
Query 102038 GA 102039
||
Sbjct 88599 GA 88600
>seq2230
Length=225668
Score = 87.8 bits (96), Expect = 4e-12
Identities = 217/327 (66%), Gaps = 17/327 (5%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| ||||||| |||| ||||||||||||||| ||| | || ||||| || || |||
Sbjct 224944 GTAGCCTTTGTCGCAGCGGAAGGAATCTTCTTTTCTGGGTCTTTTGCATCTATATTGTGG 225003
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
||||||| | || | || | || ||||| | |||||||| | ||| || |||
Sbjct 225004 CTCAAGAAACGAGGACTGATGGCCGGCCTCACATTTTCCAATGATCTTATTAGCAGAGAC 225063
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC-- 102095
|| ||| | || | |||||||| ||| || |||| ||| | || ||| |
Sbjct 225064 GAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCAAACA-------CCTGCTACACAA 225116
Query 102096 -CATCAAGAGAAAGGATTC-TTGA---AATTGTCACTGAAGCCGTCCGAATTGAACAAGA 102150
||| ||| | || || || ||| |||| || ||| | || ||||| ||
Sbjct 225117 ACATTCGGAGCAGAGAGTCAAAGAAATAATCGTCAGTGCAGC---TAGGATAGAACACGA 225173
Query 102151 ATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCA 102210
|| ||||||| ||||| | || | | | || ||||| ||| ||||||| ||
Sbjct 225174 GTTCCTCACAGAAGCCCTGACAGTGGAGCTCATCGGGATGAATTGCGCTTTGATGAAGCA 225233
Query 102211 GTACATTGAATTTGTGGCAGATAAACT 102237
|||| | ||||| |||||||| | |||
Sbjct 225234 GTACGTCGAATTCGTGGCAGACAGACT 225260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 986533966971935
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |