Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1971 89.7 1e-12 seq2230 87.8 4e-12 >seq1971 Length=167910 Score = 89.7 bits (98), Expect = 1e-12 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || ||||||| |||| ||||||||||||||| |||| | || ||||| || || ||| Sbjct 91386 GTAGCCTTTGTCGCAGCGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCTATATTGTGG 91445 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | || | || | || ||||| | |||||||| | ||| || ||| Sbjct 91446 CTCAAGAAACGAGGACTGATGGCCGGCCTCACATTTTCCAATGAACTTATTAGCAGAGAC 91505 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAA 102076 || ||| | || | |||||||| ||| || |||| ||| Sbjct 91506 GAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCAAA 91544 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || |||||||||||||| ||||||||||||||| |||| | || ||||| || |||||| Sbjct 88479 GTAGCCTTTGCTGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCGATATTCTGG 88538 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 |||| || | || | |||| || ||||| | |||||||| | ||| || ||| Sbjct 88539 CTCAAAAAACGAGGACTGATGCCCGGCCTCACATTTTCCAATGAACTTATTAGCAGAGAC 88598 Query 102038 GA 102039 || Sbjct 88599 GA 88600 >seq2230 Length=225668 Score = 87.8 bits (96), Expect = 4e-12 Identities = 217/327 (66%), Gaps = 17/327 (5%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || ||||||| |||| ||||||||||||||| ||| | || ||||| || || ||| Sbjct 224944 GTAGCCTTTGTCGCAGCGGAAGGAATCTTCTTTTCTGGGTCTTTTGCATCTATATTGTGG 225003 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | || | || | || ||||| | |||||||| | ||| || ||| Sbjct 225004 CTCAAGAAACGAGGACTGATGGCCGGCCTCACATTTTCCAATGATCTTATTAGCAGAGAC 225063 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC-- 102095 || ||| | || | |||||||| ||| || |||| ||| | || ||| | Sbjct 225064 GAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCAAACA-------CCTGCTACACAA 225116 Query 102096 -CATCAAGAGAAAGGATTC-TTGA---AATTGTCACTGAAGCCGTCCGAATTGAACAAGA 102150 ||| ||| | || || || ||| |||| || ||| | || ||||| || Sbjct 225117 ACATTCGGAGCAGAGAGTCAAAGAAATAATCGTCAGTGCAGC---TAGGATAGAACACGA 225173 Query 102151 ATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCA 102210 || ||||||| ||||| | || | | | || ||||| ||| ||||||| || Sbjct 225174 GTTCCTCACAGAAGCCCTGACAGTGGAGCTCATCGGGATGAATTGCGCTTTGATGAAGCA 225233 Query 102211 GTACATTGAATTTGTGGCAGATAAACT 102237 |||| | ||||| |||||||| | ||| Sbjct 225234 GTACGTCGAATTCGTGGCAGACAGACT 225260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 986533966971935