Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq2230 206 2e-48
seq1971 174 1e-38
seq4569 120 3e-22
seq3161 102 8e-17
>seq2230
Length=225668
Score = 206 bits (228), Expect = 2e-48
Identities = 328/464 (71%), Gaps = 5/464 (1%)
Strand=Plus/Minus
Query 11329 CACCCCCATCTTTTGATATTCACTAACTCGTCGTTCGAAAAAA-TTAGTCTTACCTTCTA 11387
||| |||||| | ||||| | | |||| || | | ||| || |||||||| |||||
Sbjct 225389 CACTCCCATCCTCTGATACTTGCCTACTC-TCTTCCCAAAGAAGTTAGTCTTCCCTTCC- 225332
Query 11388 GTGATATATACTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTA 11447
|||| |||| |||||||||| ||| ||||| | ||| |||| || || | |||| |
Sbjct 225331 GTGAAATATCCTCCATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCTAAAACCCA 225272
Query 11448 ACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCA 11507
||| | | ||| ||||| |||||||| | ||||| ||| ||| |||||||
Sbjct 225271 CCTCCAGCATAAGTCTGTCTGCCACGAATTCGACGTACTGCTTCATCAAAGCGCAATTCA 225212
Query 11508 TACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCAT 11567
| || || || ||||| | | || |||| | ||||| | |||||| || | |||
Sbjct 225211 TCCCGATGAGCTCCACTGTCAGGGCTTCTGTGAGGAACTCGTGTTCTATCCTAGCTGCAC 225152
Query 11568 CAATGATTATCGACGTTATAACT-TCCTTAGATGGTGGATGTAATAAATGTTTAAACATT 11626
| |||||| | || || | || || || |||| | ||||| |||||
Sbjct 225151 TGACGATTATTT-CTTTGACTCTCTGCTCCGAATGTTTGTGTAGCAGGTGTTTGAACATC 225093
Query 11627 AAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTT 11686
| || ||||| ||||| |||||||| |||||||| || || || ||||| ||||||||
Sbjct 225092 AGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGATCATTGGAAAATGTG 225033
Query 11687 AATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAG 11746
| |||| ||||| ||||||||| || | ||| ||||||| ||||| || |||||||||
Sbjct 225032 AGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATATAGATGCAAAAGACCCAGAAAAG 224973
Query 11747 AATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATA 11790
|| ||||| ||| | || |||| ||||| || |||||| ||
Sbjct 224972 AAGATTCCTTCCGCTGCGACAAAGGCTACGACAGGTTCTCCGTA 224929
>seq1971
Length=167910
Score = 174 bits (192), Expect = 1e-38
Identities = 310/448 (69%), Gaps = 7/448 (2%)
Strand=Plus/Minus
Query 11615 TGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCA 11674
||||| ||||| | || ||||| ||||| |||||||| |||||||| || || ||||||
Sbjct 91546 TGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCA 91487
Query 11675 TTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAAT 11734
|| |||||||| | |||| ||||| ||||||||| || | ||| ||||||| |||||
Sbjct 91486 TTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATATAGATGCAAAA 91427
Query 11735 GAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATA--TA 11792
|||||||||||||| ||||| ||| | || |||| ||||| || |||||| || ||
Sbjct 91426 GAACCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGCTACGACAGGTTCTCCGTACGTA 91367
Query 11793 -CCTTGTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATT 11851
||| ||| |||| ||||||||| || ||| ||||| || || |
Sbjct 91366 GCCTCTTTGTCTTCGATCCGGCGCAAGGCCCAATCTGCCGCCTTCTTTACACAAGGCACT 91307
Query 11852 GTTTCTATAGCGTTAAATA--AATGCATTTTTTCTATATTATCTCTTACATATGTATCTA 11909
|| || | || || || | ||| | ||||| | |||| | | || || || |
Sbjct 91306 GTCTCACTGGCATTGAAGAGGAATTC--CCTTTCTTTGGAATCTTTAATGTAAGTGTCAA 91249
Query 11910 TTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAAC 11969
| | | ||| | |||||| |||| || ||||||| || ||||| || |||||||||
Sbjct 91248 TGAGGAGACTGTCCATTTCACAATGTATGTTTTCCACGGCAATTTGGAAGCCATAGAAAT 91189
Query 11970 ATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAA 12029
| || || || | | ||| || || || | ||| | | || |||||||| |
Sbjct 91188 AACGGGCTTCCGTAATCTGAACTTCTTGGCTAAGCCGCTCCACCCAGTTTTCATTTACTA 91129
Query 12030 TACCATCACTAGATGCAAAAAATGCTAG 12057
| | |||||| | |||| | || || ||
Sbjct 91128 TGCTATCACTTGCTGCAGAGAAAGCCAG 91101
Score = 138 bits (152), Expect = 1e-27
Identities = 111/134 (83%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713
|||||||| || || |||||||| |||||||| | |||||||||| ||||||||||||
Sbjct 88600 TCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTTTG 88541
Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773
| ||| ||||| | ||||| |||||||||||||| ||||| ||||| || ||||| |||
Sbjct 88540 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGGCT 88481
Query 11774 ACTACTCTTTCTCC 11787
|| || | ||||||
Sbjct 88480 ACGACACGTTCTCC 88467
>seq4569
Length=138791
Score = 120 bits (132), Expect = 3e-22
Identities = 108/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 11652 CTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttt 11711
|||| ||||| || || |||||||| ||||| || | ||| ||||| | ||||| ||| |
Sbjct 31093 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGTCCTCTTTTCT 31034
Query 11712 ttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATG 11771
||| ||| |||||||||||||| || || || ||||| ||||| || ||||| ||||| |
Sbjct 31033 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 30974
Query 11772 CTACTACTCTTTCTCC 11787
| || || ||||| ||
Sbjct 30973 CCACCACCCTTTCCCC 30958
Score = 86.0 bits (94), Expect = 6e-12
Identities = 90/117 (77%), Gaps = 1/117 (1%)
Strand=Plus/Minus
Query 11879 TTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATA 11938
|||||| || |||||| | || || ||||||| ||||| ||||| ||||| |||| |
Sbjct 27607 TTTTCT-TAGGATCTCTGATGTAAGTGTCTATTAGCAAACTGTACATCTCTGAGTGAACA 27549
Query 11939 TTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTGTACATCC 11995
||||| || |||||||| ||||||||||| || ||||||| | ||| || |||
Sbjct 27548 TTTTCGATGAGAATTTGAAAGCCATAGAAACAGCGAGCCTCTGGAACCTGCACCTCC 27492
>seq3161
Length=206284
Score = 102 bits (112), Expect = 8e-17
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197
|||||||| ||||| || || ||||| | ||||| || || || ||||| ||||||||
Sbjct 166548 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTACTGGTATAAGGTTCAATT 166489
Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGG 37257
||||||||||| | ||||| |||| || || ||||||||||| || || || || |
Sbjct 166488 GACTCATTATTTCCCAATATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATGAGTAAA 166429
Query 37258 CTATTTCTCAATCCAT 37273
|| ||||| | ||||
Sbjct 166428 CTGTTTCTTATACCAT 166413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 467115963496080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |