Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq4260 150 2e-31
seq4304 120 3e-22
seq3296 100 2e-16
seq3042 100 2e-16
>seq4260
Length=133197
Score = 150 bits (166), Expect = 2e-31
Identities = 131/163 (80%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048
|||||||||||| ||| ||||||| || || || ||||||||||||||||||||||| |
Sbjct 112049 TCAGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTAAAGG 111990
Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108
| || || ||||||||||| | ||||||||||||||||||||||||||||| ||
Sbjct 111989 GCACACCCAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCA 111930
Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCAT 21151
||||||| ||||| || | | || || || || || |||||
Sbjct 111929 CCACGTAGAACTGGCAAAGGGCATGGCACGGGGGTAGGGCCAT 111887
>seq4304
Length=228172
Score = 120 bits (132), Expect = 3e-22
Identities = 119/153 (78%), Gaps = 1/153 (1%)
Strand=Plus/Minus
Query 20945 GTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTG 21004
||||| || || || ||||| ||||| ||| |||| || || ||||||| |||| |||
Sbjct 2886 GTAAATATGTGCATCTCCCAAAGTGTGTACAGAGTCACCTGGCTTCAGGCCTGTGATGTG 2827
Query 21005 AGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCAT 21064
||||||| || || || ||||| |||||||||||||| || | || | |||||| |
Sbjct 2826 TGCGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGACACACTCAGGCCCCT 2767
Query 21065 GTCGGCGGACCTCTGGTACAGCTGGCAGGACAG 21097
||| | ||| |||||||||||| |||||||||
Sbjct 2766 GTCTCCTGACTTCTGGTACAGCT-GCAGGACAG 2735
>seq3296
Length=145999
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 2963 TTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAAT 3022
|| || ||||| || || || | || ||||| || |||| || || ||||| | |
Sbjct 31318 TTTAAGGCATCATCCAGACTTTTGGCAAGAAAATGCACTCCCTGTGGAGGTTCCTTGAGT 31259
Query 3023 TCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAA 3082
|||||||| | || ||||||||||||||| | ||| || ||||| || || | |||
Sbjct 31258 TCTCTGCTGAGAACTATATTAATTCTGTTCTTTAAAGGTCGATTCTTCTCTGGAAAGGAG 31199
Query 3083 AACCATGTTCTTTTCCCCATAATAACCACATTCTTTTCACCTACAACCGATGGCGTAGAC 3142
||||| || | | |||||||| |||| ||||| || |||| | || || | || |
Sbjct 31198 AACCAGGTCTTCCTACCCATAATCACCAAATTCTGTTTACCTTCTACTGAAGAGGTTGTG 31139
Query 3143 GTCATTTTCTGAAAATAC 3160
|||||| | || ||||||
Sbjct 31138 GTCATTCTTTGGAAATAC 31121
>seq3042
Length=197541
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 2963 TTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAAT 3022
|| || ||||| || || || | || ||||| || ||||| || || ||||| | |
Sbjct 153712 TTTAAGGCATCATCCAGACTTTTGGCAAGAAAATGAGCTCCCTGTGGAGGTTCCTTGAGT 153771
Query 3023 TCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAA 3082
||||| || | || ||||||||||||| | | | ||| || ||| | || || |||||
Sbjct 153772 TCTCTACTGAGAACTATATTAATTCTGTCCTCTAAAGGTCGATTCGTCTCTGGAATGGAG 153831
Query 3083 AACCATGTTCTTTTCCCCATAATAACCACATTCTTTTCACCTACAACCGATGGCGTAGAC 3142
||||| || | | |||||||| |||| ||||| || |||| | || || | || |
Sbjct 153832 AACCAGGTCTTCCTACCCATAATCACCAAATTCTGTTTACCTTCTACTGAAGAAGTTGTG 153891
Query 3143 GTCATTTTCTGAAAATAC 3160
|||||| | || ||||||
Sbjct 153892 GTCATTCTTTGGAAATAC 153909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426521851269360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |