Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq15 105 7e-18 seq12339 96.9 3e-15 seq11754 82.4 8e-11 >seq15 Length=680746 Score = 105 bits (116), Expect = 7e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || |||||||| || ||||| ||||| | |||| ||||| |||||||| || Sbjct 219627 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCT 219568 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| ||||||| | ||||| || || || ||||||||||| || ||| || || Sbjct 219567 GCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTG 219508 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||| ||||||||||||| | ||| | ||||||||||||| || Sbjct 219507 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 219448 Query 139748 TTTACGAATATTTGCATA 139765 || ||||| || |||||| Sbjct 219447 TTCACGAAGATCTGCATA 219430 Score = 105 bits (116), Expect = 7e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || |||||||| || ||||| ||||| | |||| ||||| |||||||| || Sbjct 219855 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCT 219796 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| ||||||| | ||||| || || || ||||||||||| || ||| || || Sbjct 219795 GCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTC 219736 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||| ||||||||||||| | ||| | ||||||||||||| || Sbjct 219735 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 219676 Query 139748 TTTACGAATATTTGCATA 139765 || ||||| || |||||| Sbjct 219675 TTCACGAAGATCTGCATA 219658 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || |||||||| || ||||| || || || |||| | ||||| |||||||| || Sbjct 219171 GTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCG 219112 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| ||||||| | ||||| || || || ||||| ||||| || ||| || || Sbjct 219111 GCAAAGATCAGTCTCTGCTGGTCTGGTGGGATGCCCTCTTTTTCTTGGATCTTCCCCTTG 219052 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||| ||||||||||||| | ||| | ||||| || ||||| || Sbjct 219051 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTCAAGGTC 218992 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 218991 TTCACGAAGATCTGCAT 218975 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || |||||||| || ||||| ||||| | |||| ||||| |||||||| || Sbjct 219399 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCT 219340 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| ||||||| | ||||| || || || |||||||| || || ||| || || Sbjct 219339 GCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 219280 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||| ||||||||||||| | ||| | ||||||||||||| || Sbjct 219279 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 219220 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 219219 TTCACGAAGATCTGCAT 219203 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606 || |||| || | ||| | || || ||||| || ||||| || || || |||| | Sbjct 220104 AAGCGCAGGACCAGGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGC 220045 Query 139607 GAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666 ||||| |||||||| |||||| |||||| | ||||| || || || ||||| || Sbjct 220044 CCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCC 219985 Query 139667 TTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTC 139726 ||||| ||| || || | | || | ||||| ||||||||||||| | ||| Sbjct 219984 TTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 219925 Query 139727 ACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | |||||||| |||| || || ||||| || |||||| Sbjct 219924 ATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATA 219886 >seq12339 Length=50223 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/198 (71%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || |||||||| || ||||| ||||| | |||| ||||| |||||||| || Sbjct 7538 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCT 7597 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||| || | ||||| || || || |||||||| || || |||| || || Sbjct 7598 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCC-TGATCTTGGCCTTC 7656 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||| ||||||||||||| | ||| | ||||||||||||| || Sbjct 7657 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 7716 Query 139748 TTTACGAATATTTGCATA 139765 || ||||| || |||||| Sbjct 7717 TTCACGAAGATCTGCATA 7734 >seq11754 Length=121357 Score = 82.4 bits (90), Expect = 8e-11 Identities = 156/229 (68%), Gaps = 7/229 (3%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || | || ||| | || | ||| | ||||||||||| || ||||| ||||| Sbjct 47197 GCCACCCCTTAGACGGAGGACCAGGTGCAAGGTAGACTCTTTCTGGATGTTGTAATCAGA 47256 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| |||||| |||||||| || ||| | || || | ||||| || || || Sbjct 47257 AATAGTGCGGCCGTCTTCCAGCTGTTTGCCTGCAAACATGAGCCTCTGCTGGTCAGGGGG 47316 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||||||||| || ||| || || | | | | ||||| |||||||||| Sbjct 47317 GATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTTGATGGTGTCACTGGGCTCCAC 47376 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || ||| |||||||| |||| || || |||| |||| |||| Sbjct 47377 CT------TCA-GGTCTTGCCCGTCAGGGTCTTCCCGAAGATTTACATA 47418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494572354154400