Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq1971 178 1e-39
>seq1971
Length=167910
Score = 178 bits (196), Expect = 1e-39
Identities = 419/628 (67%), Gaps = 6/628 (1%)
Strand=Plus/Minus
Query 13854 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13913
|| ||||| || || | || ||||| ||||| || | ||||| ||||| |||||||||
Sbjct 91549 AGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGT 91490
Query 13914 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCA 13973
|| || |||||||| | || | ||||| ||||||||| || | ||| ||||| | |||
Sbjct 91489 TCATTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATATAGATGCA 91430
Query 13974 AATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14033
|| || || |||||||| ||||| || |||| |||| |||| | ||||||| ||
Sbjct 91429 AAAGAACCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGCTACGACAGGTTCTCCGTAC 91370
Query 14034 GATGCTTTTTTGT--TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAAT 14091
| || | ||||| ||||| || ||||| || | || || | | ||
Sbjct 91369 GTAGCCTCTTTGTCTTCGAT--CCGGCGCAAGGCCCAATCTGCCGCCTTCTTTACACAAG 91312
Query 14092 CCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTAT 14151
|| ||| ||| | ||||| || | ||||| | ||||| | | | |||||| || |
Sbjct 91311 GCACTGTCTCACTGGCATTGAAGAGGAATTCCCTTTCTTTGGAATCTTTAATGTAAGTGT 91252
Query 14152 CAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAA 14211
|||| || | || | ||||||| | ||||||||||||| || || || || ||||| |
Sbjct 91251 CAATGAGGAGACTGTCCATTTCACAATGTATGTTTTCCACGGCAATTTGGAAGCCATAGA 91192
Query 14212 AGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAA 14271
| | | ||||||| || ||||| | || | || || | |||||||| |
Sbjct 91191 AATAACGGGCTTCCGTAATCTGAACTTCTTGGCTAAGCCGCTCCACCCAGTTTTCATTTA 91132
Query 14272 CTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCAT 14331
|||| | |||||| |||||| | || |||| | | | || || ||| |||
Sbjct 91131 CTATGCTATCACTTGCTGCAGAGAAAGCCAGAACACACGAAGTGAAACATCTCTCCTCAG 91072
Query 14332 TGTTGAGTTTTTTCCAAT-CGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAA 14390
|| || || ||| | | || | ||||| ||||| || || || ||| |||||||
Sbjct 91071 GCTTCAGGGCTTCCCAGTGCTGA-ATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAG 91013
Query 14391 AAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACT 14450
|| || | ||||| |||||||| ||| | || |||| | |||||| |
Sbjct 91012 AAGGAAGACTCCGCTTTCTTATACATCTGCCAAACATCACGATATTCGACAGGAAAGATG 90953
Query 14451 ACAAATCTCGAAGATGTTTCTTTAAGAA 14478
||||| | | | |||||||| ||||
Sbjct 90952 ACAAAGCGGCAGGGGGTTTCTTTCAGAA 90925
Score = 129 bits (142), Expect = 6e-25
Identities = 110/136 (81%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
|||| ||||| ||||||||||| || |||||||| | || ||||||| |||||||||||
Sbjct 88602 CCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTT 88543
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| | ||| ||||| | ||||| || || |||||||| ||||| || ||||||||||| |
Sbjct 88542 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGG 88483
Query 14014 CTATTAATCGTTCTCC 14029
||| | ||||||||
Sbjct 88482 CTACGACACGTTCTCC 88467
Score = 96.9 bits (106), Expect = 3e-15
Identities = 79/96 (82%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 13566 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13625
|| || || ||||| | ||||| || | ||||| || |||||||||||||| || |||
Sbjct 91999 GACATCACTCCCATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCT 91940
Query 13626 TCCAGTGATATATTTTCCATAAAATCAAATGGATTT 13661
|||||||| ||||| |||||||| ||||||||||||
Sbjct 91939 TCCAGTGAAATATTCTCCATAAAGTCAAATGGATTT 91904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478285475893800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |