Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1971 178 1e-39 >seq1971 Length=167910 Score = 178 bits (196), Expect = 1e-39 Identities = 419/628 (67%), Gaps = 6/628 (1%) Strand=Plus/Minus Query 13854 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13913 || ||||| || || | || ||||| ||||| || | ||||| ||||| ||||||||| Sbjct 91549 AGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGT 91490 Query 13914 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCA 13973 || || |||||||| | || | ||||| ||||||||| || | ||| ||||| | ||| Sbjct 91489 TCATTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATATAGATGCA 91430 Query 13974 AATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14033 || || || |||||||| ||||| || |||| |||| |||| | ||||||| || Sbjct 91429 AAAGAACCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGCTACGACAGGTTCTCCGTAC 91370 Query 14034 GATGCTTTTTTGT--TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAAT 14091 | || | ||||| ||||| || ||||| || | || || | | || Sbjct 91369 GTAGCCTCTTTGTCTTCGAT--CCGGCGCAAGGCCCAATCTGCCGCCTTCTTTACACAAG 91312 Query 14092 CCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTAT 14151 || ||| ||| | ||||| || | ||||| | ||||| | | | |||||| || | Sbjct 91311 GCACTGTCTCACTGGCATTGAAGAGGAATTCCCTTTCTTTGGAATCTTTAATGTAAGTGT 91252 Query 14152 CAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAA 14211 |||| || | || | ||||||| | ||||||||||||| || || || || ||||| | Sbjct 91251 CAATGAGGAGACTGTCCATTTCACAATGTATGTTTTCCACGGCAATTTGGAAGCCATAGA 91192 Query 14212 AGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAA 14271 | | | ||||||| || ||||| | || | || || | |||||||| | Sbjct 91191 AATAACGGGCTTCCGTAATCTGAACTTCTTGGCTAAGCCGCTCCACCCAGTTTTCATTTA 91132 Query 14272 CTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCAT 14331 |||| | |||||| |||||| | || |||| | | | || || ||| ||| Sbjct 91131 CTATGCTATCACTTGCTGCAGAGAAAGCCAGAACACACGAAGTGAAACATCTCTCCTCAG 91072 Query 14332 TGTTGAGTTTTTTCCAAT-CGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAA 14390 || || || ||| | | || | ||||| ||||| || || || ||| ||||||| Sbjct 91071 GCTTCAGGGCTTCCCAGTGCTGA-ATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAG 91013 Query 14391 AAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACT 14450 || || | ||||| |||||||| ||| | || |||| | |||||| | Sbjct 91012 AAGGAAGACTCCGCTTTCTTATACATCTGCCAAACATCACGATATTCGACAGGAAAGATG 90953 Query 14451 ACAAATCTCGAAGATGTTTCTTTAAGAA 14478 ||||| | | | |||||||| |||| Sbjct 90952 ACAAAGCGGCAGGGGGTTTCTTTCAGAA 90925 Score = 129 bits (142), Expect = 6e-25 Identities = 110/136 (81%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953 |||| ||||| ||||||||||| || |||||||| | || ||||||| ||||||||||| Sbjct 88602 CCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTT 88543 Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013 | | ||| ||||| | ||||| || || |||||||| ||||| || ||||||||||| | Sbjct 88542 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGG 88483 Query 14014 CTATTAATCGTTCTCC 14029 ||| | |||||||| Sbjct 88482 CTACGACACGTTCTCC 88467 Score = 96.9 bits (106), Expect = 3e-15 Identities = 79/96 (82%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 13566 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13625 || || || ||||| | ||||| || | ||||| || |||||||||||||| || ||| Sbjct 91999 GACATCACTCCCATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCT 91940 Query 13626 TCCAGTGATATATTTTCCATAAAATCAAATGGATTT 13661 |||||||| ||||| |||||||| |||||||||||| Sbjct 91939 TCCAGTGAAATATTCTCCATAAAGTCAAATGGATTT 91904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478285475893800