Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq1971 165 8e-36
>seq1971
Length=167910
Score = 165 bits (182), Expect = 8e-36
Identities = 414/627 (66%), Gaps = 4/627 (1%)
Strand=Plus/Minus
Query 13642 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13701
|| ||||| || || | || ||||| ||||| || | ||||| ||||| |||||||||
Sbjct 91549 AGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGT 91490
Query 13702 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 13761
|| || |||||||| | || | ||||| ||||||||| || | ||| ||||| | ||
Sbjct 91489 TCATTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATATAGATGCA 91430
Query 13762 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAAC 13821
|| || || |||||||| ||||| || |||| |||| |||| | ||||||| ||
Sbjct 91429 AAAGAACCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGCTACGACAGGTTCTCCGTAC 91370
Query 13822 GATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 13881
| || | ||||| | |||| ||||| || | || || | | || |
Sbjct 91369 GTAGCCTCTTTGTCTTCGATCCGGCGCAAGGCCCAATCTGCCGCCTTCTTTACACAAGGC 91310
Query 13882 ATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCA 13941
| ||| || | |||||||| | |||| | ||||| | | | |||||| || |||
Sbjct 91309 ACTGTCTCACTGGCATTGAAGAGGAATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCA 91250
Query 13942 ATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAA 14001
|| || | || | ||||||| | ||||||||||| | || || || || ||||| |||
Sbjct 91249 ATGAGGAGACTGTCCATTTCACAATGTATGTTTTCCACGGCAATTTGGAAGCCATAGAAA 91190
Query 14002 CATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACA 14061
| | ||||| | || || || | || | || || |||||||||| ||
Sbjct 91189 TAACGGGCTTCCGTAATCTGAACTTCTTGGCTAAGCCGCTCCACCCAGTTTTCATTTACT 91130
Query 14062 ATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTG 14121
|| | |||||| |||||| | || |||| | | | || || ||| |||
Sbjct 91129 ATGCTATCACTTGCTGCAGAGAAAGCCAGAACACACGAAGTGAAACATCTCTCCTCAGGC 91070
Query 14122 TTGAGTTTTTTCCAATCGGCTAAA--TCCTTAGAAAGATCTACTTCATCAACTGTCCAAA 14179
|| || || ||| | ||| || ||||| ||||| || || || ||| ||||||| |
Sbjct 91069 TTCAGGGCTTCCCAGT--GCTGAATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAGA 91012
Query 14180 AACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTA 14239
| || | ||||| |||||||| ||| | || |||| | |||||| | |
Sbjct 91011 AGGAAGACTCCGCTTTCTTATACATCTGCCAAACATCACGATATTCGACAGGAAAGATGA 90952
Query 14240 CAAATCTTGAAGATGTTTCTTTAAGAA 14266
|||| | | | |||||||| ||||
Sbjct 90951 CAAAGCGGCAGGGGGTTTCTTTCAGAA 90925
Score = 123 bits (136), Expect = 2e-23
Identities = 109/136 (80%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741
|||| ||||| ||||||||||| || |||||||| | || ||||||| |||||||||||
Sbjct 88602 CCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTT 88543
Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801
| | ||| ||||| | || || || || |||||||| ||||| || ||||||||||| |
Sbjct 88542 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGG 88483
Query 13802 CTATTAGTCGTTCTCC 13817
||| | ||||||||
Sbjct 88482 CTACGACACGTTCTCC 88467
Score = 87.8 bits (96), Expect = 2e-12
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 13354 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCT 13413
|| || || ||||| | ||||| || | ||||| || ||||| |||||||| || |||
Sbjct 91999 GACATCACTCCCATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCT 91940
Query 13414 TCCAGTGATATATTTTCCATAAAATCGAATGGATTT 13449
|||||||| ||||| |||||||| || |||||||||
Sbjct 91939 TCCAGTGAAATATTCTCCATAAAGTCAAATGGATTT 91904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 477149701425480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |