Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1971 89.7 8e-13 seq2230 84.2 3e-11 >seq1971 Length=167910 Score = 89.7 bits (98), Expect = 8e-13 Identities = 134/188 (71%), Gaps = 12/188 (6%) Strand=Plus/Plus Query 125392 GGATCGATGACGACAAGTCTTCGTACGCCGACAGACTG--GTGGCATTCGCCGCCGTAGA 125449 ||||||| ||| | || || |||||| || | ||| || || || | ||| | || Sbjct 91348 GGATCGAAGACAAAGAGGCTACGTACG--GAGAACCTGTCGTAGCCTTTGTCGCAGCGGA 91405 Query 125450 GGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCAT 125509 || ||||||||||| ||| |||||| | || || ||||||||||| || ||||| || Sbjct 91406 AGGAATCTTCTTTTCTGGTTCTTTTGCATCTATATTGTGGCTCAAGAAACGAGGACTGAT 91465 Query 125510 GCCCGGACTGACGCACAGT----AACGAGTTTATATCTCGAGACGAGGGCCTACACTGTG 125565 | |||| || |||| | || || |||| |||||||||| ||||||||| Sbjct 91466 GGCCGGCCT----CACATTTTCCAATGAACTTATTAGCAGAGACGAGGGTTTACACTGTG 91521 Query 125566 ACTTTGCC 125573 |||||||| Sbjct 91522 ACTTTGCC 91529 >seq2230 Length=225668 Score = 84.2 bits (92), Expect = 3e-11 Identities = 133/188 (71%), Gaps = 12/188 (6%) Strand=Plus/Plus Query 125392 GGATCGATGACGACAAGTCTTCGTACGCCGACAGACTG--GTGGCATTCGCCGCCGTAGA 125449 ||||||| ||| | || || |||||| || | ||| || || || | ||| | || Sbjct 224906 GGATCGAAGACAAAGAGGCTACGTACG--GAGAACCTGTCGTAGCCTTTGTCGCAGCGGA 224963 Query 125450 GGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCAT 125509 || ||||||||||| || |||||| | || || ||||||||||| || ||||| || Sbjct 224964 AGGAATCTTCTTTTCTGGGTCTTTTGCATCTATATTGTGGCTCAAGAAACGAGGACTGAT 225023 Query 125510 GCCCGGACTGACGCACAGT----AACGAGTTTATATCTCGAGACGAGGGCCTACACTGTG 125565 | |||| || |||| | || || |||| |||||||||| ||||||||| Sbjct 225024 GGCCGGCCT----CACATTTTCCAATGATCTTATTAGCAGAGACGAGGGTTTACACTGTG 225079 Query 125566 ACTTTGCC 125573 |||||||| Sbjct 225080 ACTTTGCC 225087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 738830862775320