Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq4569 114 1e-20 seq1971 105 6e-18 >seq4569 Length=138791 Score = 114 bits (126), Expect = 1e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 13173 CTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTT 13232 |||||||||| || || || || || ||||| || || || |||||||| |||| ||| | Sbjct 31093 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGTCCTCTTTTCT 31034 Query 13233 TAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACG 13292 | | ||| |||||||||||||| || ||||| || || |||||||| || || ||||| | Sbjct 31033 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 30974 Query 13293 CTATCAACCTTTCACC 13308 | | || |||||| || Sbjct 30973 CCACCACCCTTTCCCC 30958 Score = 82.4 bits (90), Expect = 7e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 12801 TTTAAAAATCAATATCTAGAGAAAATACATCATC-GTCCTTATTTGACATAACAGACATT 12859 |||||||||| ||||| | || |||| ||| || || | | |||||| | | Sbjct 47467 TTTAAAAATCTGCATCTAAGGTGAAGACATTATCTGTAGTT-TCCGCCATAACTGCAAAA 47409 Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 |||||| || ||||| ||| ||||| || |||||||| || ||||| ||||| || Sbjct 47408 CGTTGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCCTCTAAAGAAATGTTC 47349 Query 12920 TCCATAAAATCGAAAGGATTTTTC 12943 ||||||||||| || ||||||||| Sbjct 47348 TCCATAAAATCAAAGGGATTTTTC 47325 >seq1971 Length=167910 Score = 105 bits (116), Expect = 6e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 13175 TCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTA 13234 || ||||| || || || || || |||||||| || || ||||| || ||||||||||| Sbjct 88600 TCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTTTG 88541 Query 13235 ATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCT 13294 | ||| ||||| | ||||| ||||| ||||| || |||||||| ||||| ||||| ||| Sbjct 88540 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGGCT 88481 Query 13295 A 13295 | Sbjct 88480 A 88480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429718850782914