Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq4260 105 5e-18
seq4304 104 2e-17
>seq4260
Length=133197
Score = 105 bits (116), Expect = 5e-18
Identities = 114/150 (76%), Gaps = 1/150 (1%)
Strand=Plus/Minus
Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565
|| |||||||| ||||| || ||||||||||||||||||||| || || | ||||||
Sbjct 112032 GCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTAAAGGGCACACCCAGGCCCATG 111973
Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625
| | || ||||||||||| ||||| || || ||||| ||| |||||| ||||| ||
Sbjct 111972 T-CTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGGCA 111914
Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAG 25655
| || | |||||| || || || || ||
Sbjct 111913 AAGGGCATGGCACGGGGGTAGGGCCATGAG 111884
>seq4304
Length=228172
Score = 104 bits (114), Expect = 2e-17
Identities = 182/260 (70%), Gaps = 4/260 (2%)
Strand=Plus/Minus
Query 25387 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGT 25446
||||||||| || | || | || ||||| | |||||| | || | |||||| ||||
Sbjct 2943 TGGGAAAGGC-CTTGATTCTCCCTGAAGCTGCATTTTCAGCAGCTCAATGTGATCAAGGT 2885
Query 25447 AGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAG 25506
| | || || ||||||| |||||| ||| | || || || | || || || | || |
Sbjct 2884 AAATATGTGCATCTCCCAAAGTGTGTACAGAGTCACCTGGCTTCAGGCCTGTGATGTGTG 2825
Query 25507 CCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGT 25566
| |||||||| ||||| || |||||||||||||| |||| || | | ||| |||
Sbjct 2824 CGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGACACACTCAGGCCCCTGT 2765
Query 25567 CCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACAC 25626
| || ||| ||||||| ||||| || || || || | || ||||||| || || ||
Sbjct 2764 -CTCCTGACTTCTGGTACAGCTG-CAGGACAG-TCATGGTTCATCACGTAGAAGTGGCAA 2708
Query 25627 ATGGTGTAGCACGGAGGAAG 25646
| || | |||| | || ||
Sbjct 2707 AGGGCATGGCACAGGGGCAG 2688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 339140388517161
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |