Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_006658.1
Length=30655
Score E
Sequences producing significant alignments: (Bits) Value
seq68301 100 6e-17
>seq68301
Length=6254
Score = 100 bits (110), Expect = 6e-17
Identities = 163/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 5490 AGTACAGACTTCATAGCACTTGTGACATCTACACCACTTTTAGACTTAATTGGAACTGCC 5549
|||| ||||||||||| || ||||| ||||| || ||||| | ||| || |||
Sbjct 41 AGTATTGACTTCATAGCTGCAGTAACATCCTGACCACCCTTCGACTTGACTGGCACGGCC 100
Query 5550 CAGGCATATTTTGAAAATATATCTATGATTGTAAGCAGATACTTGTATCCTTTATTGACT 5609
|| || || ||||||||||| ||||||| || || | || | | |||| || |
Sbjct 101 CACGCGTACTTTGAAAATATGTCTATGACAGTGAGTAAGTAGCGGAAATCTTTGTTCTCG 160
Query 5610 GTTGCATATGGAATCATCTCAACCAAGTCAGCTTGCCAAGTCTCATCGAGACCTCGGATA 5669
| || || |||||||| || || | ||| |||||||||||||||| | || || |||
Sbjct 161 CTAGCGTAAGGAATCATTTCCACAAGATCACCTTGCCAAGTCTCATCTATTCCGCGTATA 220
Query 5670 TCAACATGACGACGTTTATAGTTTCTACGAGCTGGTTTGTGAAGCTCTTCAGCTA 5724
||| | | || || || | | || || | ||| || | |||||||||||
Sbjct 221 TCATATTTTCTTCGCTTGTACCTGCGGCGTGCAGCTTTATGCAACTCTTCAGCTA 275
Score = 86.0 bits (94), Expect = 1e-12
Identities = 108/146 (74%), Gaps = 2/146 (1%)
Strand=Plus/Plus
Query 6161 AATATATAACTCCAGCCTCCCTAAGCTCTTCAATAATTGACATG-ATTTCATTCGTGTGA 6219
|||||||| ||||| || | | |||||||||||||| ||| ||||| || ||||||
Sbjct 705 AATATATATGCCCAGCTTCACGCAATTCTTCAATAATTGA-ATGAATTTCGTTGGTGTGA 763
Query 6220 CTTGGGTTTCCAGCAGCTTGAGATGCCATCAGTAGTCGCAAACGATCAACTAGCTCATTT 6279
| |||||||||| | | || |||| || ||| | || || || |||||||||
Sbjct 764 TTGTTATTTCCAGCAGATCGTTCGGCAATCAATAATCGAAGTCGTTCGACAAGCTCATTT 823
Query 6280 GGATCATCCCAGTAAACATAATCCAT 6305
||||| |||||||| ||| ||| ||
Sbjct 824 GGATCGTCCCAGTAGACAAGATCTAT 849
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97694524920578
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |