Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq68301 100 6e-17 >seq68301 Length=6254 Score = 100 bits (110), Expect = 6e-17 Identities = 163/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 5490 AGTACAGACTTCATAGCACTTGTGACATCTACACCACTTTTAGACTTAATTGGAACTGCC 5549 |||| ||||||||||| || ||||| ||||| || ||||| | ||| || ||| Sbjct 41 AGTATTGACTTCATAGCTGCAGTAACATCCTGACCACCCTTCGACTTGACTGGCACGGCC 100 Query 5550 CAGGCATATTTTGAAAATATATCTATGATTGTAAGCAGATACTTGTATCCTTTATTGACT 5609 || || || ||||||||||| ||||||| || || | || | | |||| || | Sbjct 101 CACGCGTACTTTGAAAATATGTCTATGACAGTGAGTAAGTAGCGGAAATCTTTGTTCTCG 160 Query 5610 GTTGCATATGGAATCATCTCAACCAAGTCAGCTTGCCAAGTCTCATCGAGACCTCGGATA 5669 | || || |||||||| || || | ||| |||||||||||||||| | || || ||| Sbjct 161 CTAGCGTAAGGAATCATTTCCACAAGATCACCTTGCCAAGTCTCATCTATTCCGCGTATA 220 Query 5670 TCAACATGACGACGTTTATAGTTTCTACGAGCTGGTTTGTGAAGCTCTTCAGCTA 5724 ||| | | || || || | | || || | ||| || | ||||||||||| Sbjct 221 TCATATTTTCTTCGCTTGTACCTGCGGCGTGCAGCTTTATGCAACTCTTCAGCTA 275 Score = 86.0 bits (94), Expect = 1e-12 Identities = 108/146 (74%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 6161 AATATATAACTCCAGCCTCCCTAAGCTCTTCAATAATTGACATG-ATTTCATTCGTGTGA 6219 |||||||| ||||| || | | |||||||||||||| ||| ||||| || |||||| Sbjct 705 AATATATATGCCCAGCTTCACGCAATTCTTCAATAATTGA-ATGAATTTCGTTGGTGTGA 763 Query 6220 CTTGGGTTTCCAGCAGCTTGAGATGCCATCAGTAGTCGCAAACGATCAACTAGCTCATTT 6279 | |||||||||| | | || |||| || ||| | || || || ||||||||| Sbjct 764 TTGTTATTTCCAGCAGATCGTTCGGCAATCAATAATCGAAGTCGTTCGACAAGCTCATTT 823 Query 6280 GGATCATCCCAGTAAACATAATCCAT 6305 ||||| |||||||| ||| ||| || Sbjct 824 GGATCGTCCCAGTAGACAAGATCTAT 849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97694524920578