Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq203 114 1e-20 seq4569 87.8 2e-12 >seq203 Length=381015 Score = 114 bits (126), Expect = 1e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 130653 AGTTCTTCTTCCGTTTCAACTTTAACAAGAGTTGCTCCCAATGAAGTACAAAATGTGTTG 130712 || || || || ||||||| | | ||||| ||| ||||| ||||| ||||| | | Sbjct 236612 AGCTCCTCCTCGGTTTCAAACTGACCAAGACCAGCTTTTAATGAGGTACAGAATGTCTGG 236553 Query 130713 CCAAATGTCCAATTTTTTGAATCTTCAGAAAAGTAAAAGCATTTATATCCAAATCCAATC 130772 | |||| |||||| ||| ||||||||||| ||||| || |||| ||||||||||||| Sbjct 236552 CTGAATGACCAATTCCTTGCGTCTTCAGAAAAATAAAAACACTTATTTCCAAATCCAATC 236493 Query 130773 CATCCCTTTGGGCAAGTAACATA 130795 ||| | |||||||| |||||||| Sbjct 236492 CATGCTTTTGGGCAGGTAACATA 236470 >seq4569 Length=138791 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 21126 TTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATTT 21185 |||||||||| |||||||| | ||| ||||||||| ||| | ||||| | | | Sbjct 47467 TTTAAAAATCTGCATCTAAGGTGAAGACATTATCTGTAGTTTCCGCCATAACTGCAAAAC 47408 Query 21186 TTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATT 21245 |||||| || ||||| ||| || || |||||||| || || || || || || | Sbjct 47407 GTTGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCCTCTAAAGAAATGTTCT 47348 Query 21246 CCATAAAATCAAATGGATTTT 21266 ||||||||||||| ||||||| Sbjct 47347 CCATAAAATCAAAGGGATTTT 47327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530301394240680