Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1971 259 6e-64 seq2230 156 5e-33 seq3161 134 2e-26 seq4569 107 2e-18 >seq1971 Length=167910 Score = 259 bits (286), Expect = 6e-64 Identities = 417/599 (70%), Gaps = 3/599 (1%) Strand=Plus/Minus Query 33289 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCG 33348 ||||| ||||||| || || || || ||||| | |||||||||||| ||||| ||||| Sbjct 91546 TGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCA 91487 Query 33349 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAAT 33408 |||||||| ||||| |||| ||| || || || || || ||||| ||||| || || || Sbjct 91486 TTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATATAGATGCAAAA 91427 Query 33409 GATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---A 33465 || |||||||||||||||||||| |||| ||||||| | | ||||| || | Sbjct 91426 GAACCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGCTACGACAGGTTCTCCGTACGTA 91367 Query 33466 CCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATC 33525 | | |||| | |||| |||||||| ||| ||| ||||||||||||| Sbjct 91366 GCCTCTTTGTCTTCGATCCGGCGCAAGGCCCAATCTGCCGCCTTCTTTACACAAGGCACT 91307 Query 33526 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATC 33585 || || ||||||| ||||| | | |||| || |||||||| ||||| || || Sbjct 91306 GTCTCACTGGCATTGAAGAGGAATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATG 91247 Query 33586 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT 33645 | ||||| | |||||| |||| |||||||| | ||| || || || || |||||| | Sbjct 91246 AGGAGACTGTCCATTTCACAATGTATGTTTTCCACGGCAATTTGGAAGCCATAGAAATAA 91187 Query 33646 CTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATT 33705 | || || |||||||| |||||| | || || ||| || | |||||||| ||||| Sbjct 91186 CGGGCTTCCGTAATCTGAACTTCTTGGCTAAGCCGCTCCACCCAGTTTTCATTTACTATG 91127 Query 33706 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 33765 | ||||| |||||| | || |||| ||| | ||| || | || || || | Sbjct 91126 CTATCACTTGCTGCAGAGAAAGCCAGAACACACGAAGTGAAACATCTCTCCTCAGGCTTC 91067 Query 33766 AGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGAT 33825 || | ||| | | || || || || | || || || || ||||||| || || Sbjct 91066 AGGGCTTCCCAGTGCTGAATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAGAAGGAA 91007 Query 33826 GCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 | ||| || || |||||||| | ||| | ||| ||||| || || || || ||||| Sbjct 91006 GACTCCGCTTTCTTATACATCTGCCAAACATCACGATATTCGACAGGAAAGATGACAAA 90948 Score = 141 bits (156), Expect = 1e-28 Identities = 104/121 (86%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||||||||| ||||| ||||| |||||||| ||||| |||||||| || || || |||| Sbjct 88602 CCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTT 88543 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| ||||| || || || || |||||||||||||||||||| ||||||||||||| Sbjct 88542 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGG 88483 Query 33446 C 33446 | Sbjct 88482 C 88482 Score = 98.7 bits (108), Expect = 1e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 33564 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33623 |||||||| ||||| || || | |||||||||||||| ||||| |||||||| ||||| Sbjct 86614 ATCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 86555 Query 33624 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33683 || || || || |||||||| | || || |||||||| |||||| | ||| || || Sbjct 86554 AATTTGGAAGCCATAGAAACAACGGGCTTCCGTAATCTGAACTTCTTGGCTAAACCGCTC 86495 Query 33684 CGCC 33687 | || Sbjct 86494 CACC 86491 >seq2230 Length=225668 Score = 156 bits (172), Expect = 5e-33 Identities = 453/685 (66%), Gaps = 18/685 (3%) Strand=Plus/Minus Query 32958 TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTT 33014 ||| |||||| |||| || | ||| ||| ||| || ||| | |||||||| | Sbjct 225437 TTAGAAGTCAGCATCCAAGGTAAAGGAATTCTCTGTCGGACTGGACGTCACTCCCATCCT 225378 Query 33015 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33074 || || | || || | || | || || ||||| || |||||| ||| |||| || Sbjct 225377 CTGATACTTGCCTACTCTCTTCCCAAAGAAGTTAGTCTTCCCTTCCG-TGAAATATCCTC 225319 Query 33075 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 33134 ||| || ||||| ||||| || | ||| || |||| |||| || || | Sbjct 225318 CATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCTAAAACCCACCTCCAGCATAAG 225259 Query 33135 TCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 33194 ||| || || |||||||| | || ||||||| | |||||||| || || || | Sbjct 225258 TCTGTCTGCCACGAATTCGACGTACTGCTTCATCAAAGCGCAATTCATCCCGATGAGCTC 225199 Query 33195 AACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTT-ATAATAG 33253 |||| || || | || || || || ||||| || | ||| ||| || || Sbjct 225198 CACTGTCAGGGCTTCTGTGAGGAACTCGTGTTCTATCCTAGCTGCA-CTGACGATTATTT 225140 Query 33254 ATCTAACGGTTTCTTCACTCG---GTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310 | | || | ||| | | || || || | | ||||| ||||||| || || | Sbjct 225139 CTTTGAC--TCTCTGCTC-CGAATGTTTGTGTAGCAGGTGTTTGAACATCAGGCAGGCAA 225083 Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370 | || ||||| | |||||||||||| ||||| || || |||||||| ||||| |||| || Sbjct 225082 AGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGATCATTGGAAAATGTGAGGCCGGCCA 225023 Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430 | || || || || || ||||| ||||| || || || || ||||||||||||||||||| Sbjct 225022 TCAGTCCTCGTTTCTTGAGCCACAATATAGATGCAAAAGACCCAGAAAAGAAGATTCCTT 224963 Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACT 33487 | |||| ||||||| | | ||||| || | | | |||| | |||| Sbjct 224962 CCGCTGCGACAAAGGCTACGACAGGTTCTCCGTACGTAGCCTCTTTGTCTTCGATCCGGC 224903 Query 33488 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33547 | |||||| ||| ||| |||||||| |||| || || || |||| | ||| Sbjct 224902 GCAAGGTCCAATCTGCCGCCTTCTTTACACAGGGCACTGTCTCACTGACATTGATGAG-G 224844 Query 33548 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33607 ||| |||| || |||||||| || | || || | ||||| | ||||| | || Sbjct 224843 AGTCCCTTTCTTTGGAATCTTTAATGTAGTTGTCAAT-GAGAGACTGTCCATTT-CACAT 224786 Query 33608 GAATGTTTTCAATGGCCATCTGAAA 33632 | |||||||| | ||| || || || Sbjct 224785 GTATGTTTTCCACGGCAATTTGGAA 224761 >seq3161 Length=206284 Score = 134 bits (148), Expect = 2e-26 Identities = 112/137 (82%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 || ||||||||||| ||||| ||||| ||||| || || ||||||||||| ||||| | Sbjct 166548 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTACTGGTATAAGGTTCAATT 166489 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 ||||||||||||||||| || ||||||||||| ||||| ||||| || || | | |||| Sbjct 166488 GACTCATTATTTCCCAATATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATGAGTAAA 166429 Query 62457 CTATTTCTAAGACCGTA 62473 || ||||| | ||| || Sbjct 166428 CTGTTTCTTATACCATA 166412 Score = 100 bits (110), Expect = 4e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 63212 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63271 || |||||||||||| |||||||| ||||||||||| || | || || || |||| | Sbjct 156256 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 156197 Query 63272 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63331 ||||| || |||||||| ||||| || | ||| |||||| | | || || ||||||| Sbjct 156196 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 156137 Query 63332 CGGTTCCAAGTATATGGC 63349 || |||| ||| || || Sbjct 156136 AGGCTCCAGGTAAATAGC 156119 Score = 100 bits (110), Expect = 4e-16 Identities = 129/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 62575 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 62634 |||| || || ||||| || | || || || | |||||| || || || || || || | Sbjct 161952 CATAGGTTTCATATGGGCCATACTCCTTGGCCAATTCACAGCTGGCTTCCAAGGCTCCAT 161893 Query 62635 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 62694 ||||||||||||| ||||||| |||||| | ||| || ||| | || ||||| || | Sbjct 161892 AATAAATGGTTTCAAAGATCTGCTTATTCAATAATTGGGCCTCCGGACTCTCAAAAGGGT 161833 Query 62695 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATG 62752 | | | |||||||| ||||| || | ||||| || ||||| || || || | ||| Sbjct 161832 ACCTCATCAGAATAAAAGCGTCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATG 161775 Score = 82.4 bits (90), Expect = 9e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 63456 ATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 63515 || ||||| ||| | || |||||| ||| | | | ||| |||||||| ||| || Sbjct 152528 ATGTAGCTGCCAGTAGCTCGAATACAACTCACAGCAACACCAATTCCCCCAGCCGACTTG 152469 Query 63516 GAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATG 63575 || || ||||| || | |||| |||||||| ||||| || ||||||||||| |||| Sbjct 152468 GATATCAATGCACACTGCTTTAGAGTGTCATAAATACCTTCAATGCTATCATCTTTCATA 152409 Query 63576 TTAAGTAGAAAACAGCTA 63593 | || || ||||||||| Sbjct 152408 CTCAGAAGGAAACAGCTA 152391 >seq4569 Length=138791 Score = 107 bits (118), Expect = 2e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 33328 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33387 || ||||| || || ||||| |||||||| || ||||| ||||| || || | || || Sbjct 31091 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGTCCTCTTTTCTTT 31032 Query 33388 AGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446 ||||| ||||| | ||| || ||||| || ||||| ||||||||||| ||||||||||| Sbjct 31031 AGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 30973 Score = 91.5 bits (100), Expect = 2e-13 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 33686 CCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33745 |||||||||||||||| ||||||||||||||||||||||| || || | || |||| Sbjct 26732 CCAAATTTTCATTCACAATTCCGTCACTGGCTGCAAAAAAGGCTAAGATGTGAGAGATAA 26673 Query 33746 AATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTAC 33803 |||| || || |||| | | || || ||||| | | || ||| || |||| ||| || Sbjct 26672 AATACTTCTCTTCTGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTGATAAATCAAC 26615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621074021130120