Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1971 262 5e-65 seq2230 163 4e-35 seq3161 134 2e-26 seq4569 102 1e-16 >seq1971 Length=167910 Score = 262 bits (290), Expect = 5e-65 Identities = 418/599 (70%), Gaps = 3/599 (1%) Strand=Plus/Minus Query 32646 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 32705 ||||| ||||||| || || || || ||||||| |||||||||||| ||||| | ||| Sbjct 91546 TGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCA 91487 Query 32706 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 32765 |||||||| ||||| |||| ||| || || || || || ||||| ||||| || ||||| Sbjct 91486 TTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATATAGATGCAAAA 91427 Query 32766 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---A 32822 || ||||||||||| |||||||| |||| ||||||| | | ||||| || | Sbjct 91426 GAACCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGCTACGACAGGTTCTCCGTACGTA 91367 Query 32823 CCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 32882 | | |||| | |||| |||||||| ||| ||| ||||||||||||| | Sbjct 91366 GCCTCTTTGTCTTCGATCCGGCGCAAGGCCCAATCTGCCGCCTTCTTTACACAAGGCACT 91307 Query 32883 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 32942 ||||| | ||||| ||||| | | |||| || |||||||| || || ||||| Sbjct 91306 GTCTCACTGGCATTGAAGAGGAATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATG 91247 Query 32943 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCAT 33002 | ||||| | |||||| |||| |||||||| | ||| ||||| || || ||||| | Sbjct 91246 AGGAGACTGTCCATTTCACAATGTATGTTTTCCACGGCAATTTGGAAGCCATAGAAATAA 91187 Query 33003 CTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATT 33062 | || || |||||||| |||||| | || || || | | |||||||| ||||| Sbjct 91186 CGGGCTTCCGTAATCTGAACTTCTTGGCTAAGCCGCTCCACCCAGTTTTCATTTACTATG 91127 Query 33063 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 33122 | ||||| |||||| | || |||| ||| | ||| || | || || || | Sbjct 91126 CTATCACTTGCTGCAGAGAAAGCCAGAACACACGAAGTGAAACATCTCTCCTCAGGCTTC 91067 Query 33123 AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGAT 33182 || | ||| | | || || || || | ||||| || || ||||||| || || Sbjct 91066 AGGGCTTCCCAGTGCTGAATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAGAAGGAA 91007 Query 33183 GCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 | ||| || || |||||||| | ||| | ||| |||||| | ||||| || ||||| Sbjct 91006 GACTCCGCTTTCTTATACATCTGCCAAACATCACGATATTCGACAGGAAAGATGACAAA 90948 Score = 132 bits (146), Expect = 6e-26 Identities = 102/121 (84%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742 |||||||||| ||||| | ||| |||||||| ||||| |||||||| || || || |||| Sbjct 88602 CCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTT 88543 Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802 | ||||| ||||| || ||||| || ||||||||||| |||||||| ||||| ||||||| Sbjct 88542 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGG 88483 Query 32803 C 32803 | Sbjct 88482 C 88482 Score = 96.9 bits (106), Expect = 4e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 32921 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 32980 |||||||| || || ||||| | |||||||||||||| ||||| |||||||| ||||| Sbjct 86614 ATCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 86555 Query 32981 CATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCT 33026 ||||| || || ||||| || | || || |||||||| |||||| Sbjct 86554 AATTTGGAAGCCATAGAAACAACGGGCTTCCGTAATCTGAACTTCT 86509 >seq2230 Length=225668 Score = 163 bits (180), Expect = 4e-35 Identities = 247/347 (71%), Gaps = 6/347 (2%) Strand=Plus/Minus Query 32646 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 32705 ||||| ||||||| || || || || ||||||| |||||||||||| ||||| | || Sbjct 225104 TGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGATCA 225045 Query 32706 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 32765 |||||||| ||||| |||| ||| || || || || || ||||| ||||| || ||||| Sbjct 225044 TTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATATAGATGCAAAA 224985 Query 32766 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---A 32822 || ||||||||||| |||||||| |||| ||||||| | | ||||| || | Sbjct 224984 GACCCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGCTACGACAGGTTCTCCGTACGTA 224925 Query 32823 CCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 32882 | | |||| | |||| | |||||| ||| ||| |||||||| |||| | Sbjct 224924 GCCTCTTTGTCTTCGATCCGGCGCAAGGTCCAATCTGCCGCCTTCTTTACACAGGGCACT 224865 Query 32883 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 32942 ||||| | |||| | ||| ||| |||| || |||||||| || | ||||| Sbjct 224864 GTCTCACTGACATTGATGAG-GAGTCCCTTTCTTTGGAATCTTTAATGTAGTTGTCAAT- 224807 Query 32943 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAA 32989 | ||||| | ||||| | ||| |||||||| | ||| ||||| || Sbjct 224806 GAGAGACTGTCCATTT-CACATGTATGTTTTCCACGGCAATTTGGAA 224761 >seq3161 Length=206284 Score = 134 bits (148), Expect = 2e-26 Identities = 112/137 (82%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62192 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 62251 || ||||||||||| ||||| ||||| ||||| || || ||||||||||| ||||| | Sbjct 166548 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTACTGGTATAAGGTTCAATT 166489 Query 62252 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62311 ||||||||||||||||| || ||||||||||| ||||| ||||| || || | | |||| Sbjct 166488 GACTCATTATTTCCCAATATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATGAGTAAA 166429 Query 62312 CTATTTCTAAGACCGTA 62328 || ||||| | ||| || Sbjct 166428 CTGTTTCTTATACCATA 166412 Score = 105 bits (116), Expect = 8e-18 Identities = 123/166 (74%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869 |||| |||| ||| |||||||||||||| | || || ||||| || || || || || | Sbjct 143138 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCAATCCTTGCTGCCAGGA 143079 Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 143078 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTCGCAGCTGTTTCAGCAGCCAAAGTATCTA 143019 Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975 ||| || || || || ||| | |||| |||||||| || ||||| Sbjct 143018 GTTCCACAGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCAT 142973 Score = 105 bits (116), Expect = 8e-18 Identities = 130/178 (73%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 62430 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 62489 |||| || || ||||| || | || || || | |||||| || || || || || || | Sbjct 161952 CATAGGTTTCATATGGGCCATACTCCTTGGCCAATTCACAGCTGGCTTCCAAGGCTCCAT 161893 Query 62490 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGAT 62549 ||||||||||||| ||||||| |||||| | ||| || ||| | || ||||| || | Sbjct 161892 AATAAATGGTTTCAAAGATCTGCTTATTCAATAATTGGGCCTCCGGACTCTCAAAAGGGT 161833 Query 62550 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATG 62607 | | | |||||||| |||||||| | ||||| || ||||| || || || | ||| Sbjct 161832 ACCTCATCAGAATAAAAGCGTCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATG 161775 Score = 100 bits (110), Expect = 4e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 63067 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63126 || |||||||||||| |||||||| ||||||||||| || | || || || |||| | Sbjct 156256 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 156197 Query 63127 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63186 ||||| || |||||||| ||||| || | ||| |||||| | | || || ||||||| Sbjct 156196 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 156137 Query 63187 CGGTTCCAAGTATATGGC 63204 || |||| ||| || || Sbjct 156136 AGGCTCCAGGTAAATAGC 156119 >seq4569 Length=138791 Score = 102 bits (112), Expect = 1e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 32685 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 32744 || ||||| || || | ||| |||||||| || ||||| ||||| || || | || || Sbjct 31091 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGTCCTCTTTTCTTT 31032 Query 32745 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 32803 ||||| ||||| | ||||| ||||| || ||||||||||||||||| || |||||||| Sbjct 31031 AGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 30973 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 33045 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 33104 |||||||||||||| ||||||||||||||||||||||| || || | || |||||| Sbjct 26730 AAATTTTCATTCACAATTCCGTCACTGGCTGCAAAAAAGGCTAAGATGTGAGAGATAAAA 26671 Query 33105 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCAC 33160 || || || |||| | | || || ||||| | | || ||| || |||| ||| || Sbjct 26670 TACTTCTCTTCTGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTGATAAATCAAC 26615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631726692337200