Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1971 201 1e-46 seq2230 102 9e-17 >seq1971 Length=167910 Score = 201 bits (222), Expect = 1e-46 Identities = 432/638 (68%), Gaps = 6/638 (1%) Strand=Plus/Minus Query 93062 GGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCT 93121 ||||| |||| | | ||| |||| | ||| |||||||| |||||||| |||||| Sbjct 91561 GGTTTGTGTAGCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCT 91502 Query 93122 CGTGATATCAACT-CATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCA 93180 | || || || | ||||| ||||| | || | | ||||||||||||||||||||| Sbjct 91501 C-TGCTAATAAGTTCATTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCA 91443 Query 93181 AAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAAT 93240 ||||| || |||||| ||||||||| || || |||||| | || |||| || || | Sbjct 91442 CAATATAGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGCTACGAC 91383 Query 93241 ACGTTCGGCAAAATTTGCGGAATTA-CTGCTGATCCATTTTAAAGCCCAATCGGCTTTTT 93299 | |||| | | | || || || | ||||| || |||||||| || | Sbjct 91382 AGGTTCTCCGTACGTAGCCTCTTTGTCTTC-GATCCGGCGCAAGGCCCAATCTGCCGCCT 91324 Query 93300 TCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTC 93359 |||| | |||||| | ||| || | || || || ||| | || | || | |||||| Sbjct 91323 TCTTTACACAAGGCACTGTCTCACTGGCATTGAAGAGGAATTCCCTTTCTTTGGAATCTT 91264 Query 93360 GTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTT 93419 ||||| || || || | ||| | ||||||| |||| | || |||| ||||||| Sbjct 91263 TAATGTAAGTGTCAATGAGGAGACTGTCCATTTCACAATGTATGTTTTCCACGGCAATTT 91204 Query 93420 GGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGA 93479 |||| || |||||| | | |||||||| ||||| |||||||| || | ||| || Sbjct 91203 GGAAGCCATAGAAATAACGGGCTTCCGTAATCTGAACTTCTTGGCTAAGCCGCTCCACCC 91144 Query 93480 GATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAAT 93539 |||||||| ||||| | ||| ||||||| | ||||||| | | | | ||| Sbjct 91143 AGTTTTCATTTACTATGCTATCACTTGCTGCAGAGAAAGCCAGAACACACGAAGTGAAAC 91084 Query 93540 GTTTCTCATCATCTTTAAGCTTATCCCAAT-CGGATAGATCTTTTGAAAGATCGACTTCT 93598 | |||| ||| || || ||||| | | || | || || ||||| || || || Sbjct 91083 ATCTCTCCTCAGGCTTCAGGGCTTCCCAGTGCTGA-ATGTCCTTGGAAAGGTCCACCTCC 91025 Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGA 93658 || | ||||| || || | || ||||| || ||||| | ||| | || |||||| Sbjct 91024 TCAGCTGTCCAGAAGGAAGACTCCGCTTTCTTATACATCTGCCAAACATCACGATATTCG 90965 Query 93659 ATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAG 93696 | ||||| |||||||| || ||| | ||||| || Sbjct 90964 ACAGGAAAGATGACAAAGCGGCAGGGGGTTTCTTTCAG 90927 Score = 96.9 bits (106), Expect = 4e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 |||||| ||||| | || || | |||||||||||| |||||||| ||||| || ||| Sbjct 88582 TCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTTTGAGCCAGAATATCGATGCA 88523 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246 ||| ||||||||| || || |||||||| || ||||| || || | |||||| Sbjct 88522 AAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGGCTACGACACGTTC 88470 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412 |||||| ||||| || || || | ||| ||||||||||||||| | || ||||| Sbjct 86616 GAATCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATG 86557 Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTG 93462 ||||||||||| || |||||||| | |||||||| ||||| |||||||| Sbjct 86556 GCAATTTGGAAGCCATAGAAACAACGGGCTTCCGTAATCTGAACTTCTTG 86507 >seq2230 Length=225668 Score = 102 bits (112), Expect = 9e-17 Identities = 125/168 (74%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 93080 TTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAAC-TCATT 93138 ||| |||| | ||| |||||||| |||||||| ||||||| || || || ||||| Sbjct 225101 TTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTC-TGCTAATAAGATCATT 225043 Query 93139 GCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACT 93198 | ||||| | || | | ||||||||||||||||||||| ||||| || |||||| Sbjct 225042 GGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATATAGATGCAAAAGA 224983 Query 93199 ACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246 |||||||| || || |||||| | || |||| || || | | |||| Sbjct 224982 CCCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGCTACGACAGGTTC 224935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555186340456680