Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq15 89.7 4e-13
seq12339 84.2 2e-11
seq24981 82.4 6e-11
>seq15
Length=680746
Score = 89.7 bits (98), Expect = 4e-13
Identities = 139/199 (70%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || || || | ||||| || || |||| || || ||||| |||
Sbjct 219202 GATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 219261
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| ||| | || | | || || || || || ||||| || || || || || ||
Sbjct 219262 TGACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCAGACCA 219321
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | || || ||||| ||||||||| | || ||| |||||| |||| ||||||||
Sbjct 219322 GCAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAA 219381
Query 22398 CATTCAAAAAGAATCCACC 22416
||| || ||||| || |||
Sbjct 219382 CATCCAGAAAGAGTCGACC 219400
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||| || || |||| || || ||||| |||
Sbjct 219431 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219490
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | |||| || || || || || || || || || || || ||
Sbjct 219491 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCAGACCAG 219550
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| ||||||||| | || ||| |||||| |||| |||||||||
Sbjct 219551 CAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAAC 219610
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || ||||| || |||
Sbjct 219611 ATCCAGAAAGAGTCGACC 219628
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||| || || |||| || || ||||| |||
Sbjct 219659 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219718
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || | || || || || || || || || || || || || ||
Sbjct 219719 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCAGACCAG 219778
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| ||||||||| | || ||| |||||| |||| |||||||||
Sbjct 219779 CAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAAC 219838
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || ||||| || |||
Sbjct 219839 ATCCAGAAAGAGTCGACC 219856
Score = 86.0 bits (94), Expect = 5e-12
Identities = 154/225 (68%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | || || || || |||| || || ||||| |||
Sbjct 219887 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219946
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | |||| || || || ||||||||||| || || || || ||
Sbjct 219947 GACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 220006
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| || |||||| | || ||| |||||| | || || ||||||
Sbjct 220007 CAGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 220066
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGA 22443
|| || ||||||||||| | || | || |||| ||| | |||
Sbjct 220067 ATCCAGAAAGAATCCACTCTGCACCTGGTCCTGCGCTTGAGGGGA 220111
>seq12339
Length=50223
Score = 84.2 bits (92), Expect = 2e-11
Identities = 138/198 (70%), Gaps = 1/198 (1%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||| || || |||| || || ||||| |||
Sbjct 7733 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 7674
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | || || || || || ||||| || || || || || ||
Sbjct 7673 GACACCATCGAGAACGTGAAGGCCAAGAT-CAGGATAAGGAAGGCATCCCCCCTGACCAG 7615
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| ||||||||| | || ||| |||||| |||| |||||||||
Sbjct 7614 CAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAAC 7555
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || ||||| || |||
Sbjct 7554 ATCCAGAAAGAGTCGACC 7537
>seq24981
Length=33127
Score = 82.4 bits (90), Expect = 6e-11
Identities = 143/207 (69%), Gaps = 1/207 (0%)
Strand=Plus/Minus
Query 22221 GCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGA 22280
||| || ||||| || || | || || || || |||||||||| || || || |
Sbjct 6866 GCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCAAACTCAGTGT 6807
Query 22281 TACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACA 22340
||| || || ||||| ||||| |||||| |||| || | || | |||||
Sbjct 6806 CACCACTGAGAATGTCAAAGCCAAAATCAAAGACACTGAGGACATCCTGCCTCACCAACA 6747
Query 22341 ACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACAT 22400
|||| || ||||| | ||||||| | |||||| ||| || |||| || || || ||
Sbjct 6746 GAGTCTGATTTTTGCAGACAAACAGCT-GAGGATGGCCGTACTCTCTCAGACTATAATAT 6688
Query 22401 TCAAAAAGAATCCACCATACATTTAGT 22427
|| |||||||||||| |||| || ||
Sbjct 6687 CCAGAAAGAATCCACCCTACACTTGGT 6661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418497446302705
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |