Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq15 89.7 4e-13 seq12339 84.2 2e-11 seq24981 82.4 6e-11 >seq15 Length=680746 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || || | ||||| || || |||| || || ||||| ||| Sbjct 219202 GATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 219261 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | || | | || || || || || ||||| || || || || || || Sbjct 219262 TGACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCAGACCA 219321 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | || || ||||| ||||||||| | || ||| |||||| |||| |||||||| Sbjct 219322 GCAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAA 219381 Query 22398 CATTCAAAAAGAATCCACC 22416 ||| || ||||| || ||| Sbjct 219382 CATCCAGAAAGAGTCGACC 219400 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || ||||| ||| Sbjct 219431 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219490 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || || || || || || || || || || || || Sbjct 219491 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCAGACCAG 219550 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||||||| | || ||| |||||| |||| ||||||||| Sbjct 219551 CAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAAC 219610 Query 22399 ATTCAAAAAGAATCCACC 22416 || || ||||| || ||| Sbjct 219611 ATCCAGAAAGAGTCGACC 219628 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || ||||| ||| Sbjct 219659 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219718 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || || || || || || || || || || || || || Sbjct 219719 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCAGACCAG 219778 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||||||| | || ||| |||||| |||| ||||||||| Sbjct 219779 CAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAAC 219838 Query 22399 ATTCAAAAAGAATCCACC 22416 || || ||||| || ||| Sbjct 219839 ATCCAGAAAGAGTCGACC 219856 Score = 86.0 bits (94), Expect = 5e-12 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || ||||| ||| Sbjct 219887 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219946 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || || || ||||||||||| || || || || || Sbjct 219947 GACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 220006 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || |||||| | || ||| |||||| | || || |||||| Sbjct 220007 CAGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 220066 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGA 22443 || || ||||||||||| | || | || |||| ||| | ||| Sbjct 220067 ATCCAGAAAGAATCCACTCTGCACCTGGTCCTGCGCTTGAGGGGA 220111 >seq12339 Length=50223 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/198 (70%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || ||||| ||| Sbjct 7733 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 7674 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || || || || ||||| || || || || || || Sbjct 7673 GACACCATCGAGAACGTGAAGGCCAAGAT-CAGGATAAGGAAGGCATCCCCCCTGACCAG 7615 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||||||| | || ||| |||||| |||| ||||||||| Sbjct 7614 CAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAAC 7555 Query 22399 ATTCAAAAAGAATCCACC 22416 || || ||||| || ||| Sbjct 7554 ATCCAGAAAGAGTCGACC 7537 >seq24981 Length=33127 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/207 (69%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 22221 GCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGA 22280 ||| || ||||| || || | || || || || |||||||||| || || || | Sbjct 6866 GCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCAAACTCAGTGT 6807 Query 22281 TACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACA 22340 ||| || || ||||| ||||| |||||| |||| || | || | ||||| Sbjct 6806 CACCACTGAGAATGTCAAAGCCAAAATCAAAGACACTGAGGACATCCTGCCTCACCAACA 6747 Query 22341 ACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACAT 22400 |||| || ||||| | ||||||| | |||||| ||| || |||| || || || || Sbjct 6746 GAGTCTGATTTTTGCAGACAAACAGCT-GAGGATGGCCGTACTCTCTCAGACTATAATAT 6688 Query 22401 TCAAAAAGAATCCACCATACATTTAGT 22427 || |||||||||||| |||| || || Sbjct 6687 CCAGAAAGAATCCACCCTACACTTGGT 6661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418497446302705