Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq2586 107 2e-18 seq4730 105 6e-18 seq24761 100 2e-16 seq23190 95.1 1e-14 seq15 95.1 1e-14 seq12339 91.5 1e-13 seq100962 84.2 2e-11 seq2697 84.2 2e-11 >seq2586 Length=172570 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || ||||| || | ||| | || || || || ||||||||||| || Sbjct 46672 ACCACCACGAAGACTCAACACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGA 46731 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || |||||| |||||| ||||| || ||||| |||| || | || ||||| ||||| Sbjct 46732 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGG 46791 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| ||||| ||||| |||| | ||| || | || | || |||||| Sbjct 46792 AATTCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTTTCTACTGCATCCGAGGGTTCGAC 46851 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA 114381 || | || | || || || ||| | || || || |||||||||| Sbjct 46852 CTCGAGAGTGATGGTCTTCCCCGTCTGGGTCTTCACGAAAATCTGCA 46898 >seq4730 Length=198489 Score = 105 bits (116), Expect = 6e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| |||||||| || | ||| | || || || | |||| |||||| || Sbjct 51042 ACCACCACGGAGTCTCAACACAAGATGAAGAGTGGACTCCTCTTGAGTGTTGTGGTC--- 50986 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||||| |||||| ||||| || ||||| |||| || | || ||||| ||||| Sbjct 50985 CA-AGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGG 50927 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| ||||| ||||| |||| | || | || || | || |||||| Sbjct 50926 AATTCCTTCCTTGTCCTGGATCTTGACCTTTACATTCTCTATCGTATCCGAGGGTTCGAC 50867 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || | || || || || || ||||| || || ||||||||||||||| Sbjct 50866 CTCGAGAGTGACGGTCTTCCCCGTCAGGGTCTTCACAAAAATCTGCATG 50818 >seq24761 Length=36067 Score = 100 bits (110), Expect = 2e-16 Identities = 159/227 (70%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| |||| |||||||| || | ||| | || || | |||||||||||||| || Sbjct 10529 ACCACCACAAAGTCTCAACACAATATGAAGAGTGGACCCCTTTTGAATGTTGTAGTCAAA 10588 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || |||||| |||||| ||||| || ||||| |||| || | ||| ||||| || | Sbjct 10589 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGGGA 10648 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| ||||| ||||| |||| | ||| | || || | || ||| || Sbjct 10649 AATTCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTTCTATTGTATCCGAGGGTTCAAC 10708 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA 114381 || | || | || || || ||||| || || || |||||||||| Sbjct 10709 CTCGAGAGTGATGGTCTT-CCTGTCAGGGTCTTCACGAAAATCTGCA 10754 >seq23190 Length=44765 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| |||||||| || | ||| | || | || |||||||||||||| || | Sbjct 17142 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCCGAC 17083 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | |||||| || ||| |||| || ||||| |||| || | || ||||| |||||| Sbjct 17082 AGAGTACGTCCATTTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAGGA 17023 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||| ||||| ||||| |||| | ||| | || || | || || ||| Sbjct 17022 ATTCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTTGACC 16963 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | | || | || || || ||||| || || || || |||||||| Sbjct 16962 TTGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAATATCTGCAT 16916 >seq15 Length=680746 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || ||||||||||| | ||| || |||||| || ||||| || Sbjct 219627 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCT 219568 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| ||||| || || ||||||||||| || ||||| || Sbjct 219567 GCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTG 219508 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| ||| || || |||| ||| | || ||||||||||| || Sbjct 219507 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 219448 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 219447 TTCACGAAGATCTGCAT 219431 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || ||||||||||| | ||| || |||||| || ||||| || Sbjct 219855 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCT 219796 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| ||||| || || ||||||||||| || ||||| || Sbjct 219795 GCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTC 219736 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| ||| || || |||| ||| | || ||||||||||| || Sbjct 219735 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 219676 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 219675 TTCACGAAGATCTGCAT 219659 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || ||||||||||| | ||| || |||||| || ||||| || Sbjct 219399 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCT 219340 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| ||||| || || |||||||| || || ||||| || Sbjct 219339 GCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 219280 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| ||| || || |||| ||| | || ||||||||||| || Sbjct 219279 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 219220 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 219219 TTCACGAAGATCTGCAT 219203 >seq12339 Length=50223 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/197 (71%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || ||||||||||| | ||| || |||||| || ||||| || Sbjct 7538 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCT 7597 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || ||||||| | ||| ||||| || || |||||||| || || ||||| || Sbjct 7598 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATC-CTGATCTTGGCCTTC 7656 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| ||| || || |||| ||| | || ||||||||||| || Sbjct 7657 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 7716 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 7717 TTCACGAAGATCTGCAT 7733 >seq100962 Length=431 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213 |||| |||| |||||||| | | ||| | ||||| || |||||||||||||| || Sbjct 30 TACCAGCACGAAGTCTCAACAGAAGATGAAAAGTAGACTCCTTTTGAATGTTGTAGTCAG 89 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 || |||||| |||||| ||||| || ||||| || | || | | ||||| | || Sbjct 90 ACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGGTTAGTCTTCGCTGGTCAGAAG 149 Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333 |||| |||| || || ||||| |||| | ||| | || || | || ||||| Sbjct 150 GAATTACTTCCTTATCTTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCGA 209 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || | || || || || ||| | | || | |||||||||||| Sbjct 210 CCTCGAGAGTGGTGGTCTTCCCTGTCCGGATCTTCATAAAAATCTGCAT 258 >seq2697 Length=152082 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 114159 CCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATA 114218 ||||| |||||||| || | ||| | | || || |||| | |||||| || || | Sbjct 60034 CCACGAAGTCTCAACACAAGATGAAGGATGGACTCCTTTTCAGTGTTGTGTTCAGACAAA 60093 Query 114219 GTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATG 114278 ||||| |||||| ||||| || |||| | | || | || ||| | |||||||| Sbjct 60094 GTACGTCCATCTTCCAGTTGCTTGCCAGTAAAACTCAGTCTTTGCTGGGCAGGAGGAATT 60153 Query 114279 CCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCC 114338 ||||| | ||| ||||| |||| | ||| | || || | || |||||| || Sbjct 60154 CCTTCCTCGTCCTGGATCTTGGCCTTTACGTTTTCTATCGTATCCGAGGGTTCGACCTCG 60213 Query 114339 ACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || || || || || ||||| || || || ||||||||||| Sbjct 60214 AGAGTGACGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 60257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418902654823884